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Chain graphs combine directed and undirected graphs and their underlying mathematics combines properties of the two. This paper gives a simplified definition of chain graphs based on a hierarchical combination of Bayesian (directed) and…

Artificial Intelligence · Computer Science 2013-02-21 Wray L. Buntine

Graph-based modeling plays a fundamental role in many areas of computer science. In this paper, we introduce systems of graph formulas with variables for specifying graph properties; this notion generalizes the graph formulas introduced in…

Formal Languages and Automata Theory · Computer Science 2026-01-23 Frank Drewes , Berthold Hoffmann , Mark Minas

The era of data deluge has sparked the interest in graph-based learning methods in a number of disciplines such as sociology, biology, neuroscience, or engineering. In this paper, we introduce a graph recurrent neural network (GRNN) for…

Machine Learning · Computer Science 2019-02-19 Vassilis N. Ioannidis , Antonio G. Marques , Georgios B. Giannakis

We demonstrate how category theory provides specifications that can efficiently be implemented via imperative algorithms and apply this to the field of graph rewriting. By examples, we show how this paradigm of software development makes it…

Logic in Computer Science · Computer Science 2023-04-03 Kristopher Brown , Evan Patterson , Tyler Hanks , James Fairbanks

Term graph rewriting provides a formalism for implementing term rewriting in an efficient manner by avoiding duplication. Infinitary term rewriting has been introduced to study infinite term reduction sequences. Such infinite reductions can…

Logic in Computer Science · Computer Science 2011-07-05 Patrick Bahr

In this paper we reformulate in a simpler way the combinatoric core of constructive quantum field theory We define universal rational combinatoric weights for pairs made of a graph and one of its spanning trees. These weights are nothing…

Mathematical Physics · Physics 2015-06-15 Vincent Rivasseau , Zhituo Wang

We recently introduced a formalism for the modeling of temporal networks, that we call stream graphs. It emphasizes the streaming nature of data and allows rigorous definitions of many important concepts generalizing classical graphs. This…

Social and Information Networks · Computer Science 2021-11-24 Matthieu Latapy , Clémence Magnien , Tiphaine Viard

The Burling sequence is a sequence of triangle-free graphs of increasing chromatic number. Any graph which is an induced subgraph of a graph in this sequence is called a Burling graph. These graphs have attracted some attention because they…

Combinatorics · Mathematics 2025-03-06 Pegah Pournajafi , Nicolas Trotignon

Recursive graph queries are increasingly popular for extracting information from interconnected data found in various domains such as social networks, life sciences, and business analytics. Graph data often come with schema information that…

Databases · Computer Science 2025-02-13 Chandan Sharma , Pierre Genevès , Nils Gesbert , Nabil Layaïda

Rewriting is a formalism widely used in computer science and mathematical logic. The classical formalism has been extended, in the context of functional languages, with an order over the rules and, in the context of rewrite based languages,…

Logic in Computer Science · Computer Science 2019-06-12 Horatiu Cirstea , Pierre-Etienne Moreau

Recent work at the intersection of formal language theory and graph theory has explored graph grammars for graph modeling. However, existing models and formalisms can only operate on homogeneous (i.e., untyped or unattributed) graphs. We…

Social and Information Networks · Computer Science 2023-01-06 Satyaki Sikdar , Neil Shah , Tim Weninger

The relationship between Term Graph Rewriting and Term Rewriting is well understood: a single term graph reduction may correspond to several term reductions, due to sharing. It is also known that if term graphs are allowed to contain…

Logic in Computer Science · Computer Science 2011-02-15 Andrea Corradini , Frank Drewes

Representing and exploiting multivariate signals requires capturing relations between variables, which we can represent by graphs. Graph dictionaries allow to describe complex relational information as a sparse sum of simpler structures,…

Machine Learning · Computer Science 2026-01-09 William Cappelletti , Pascal Frossard

With good explanatory power and controllability, rule-based methods play an important role in many tasks such as knowledge reasoning and decision support. However, existing studies primarily focused on learning chain-like rules, which limit…

Artificial Intelligence · Computer Science 2025-01-07 Wangtao Sun , Shizhu He , Jun Zhao , Kang Liu

Recently, deep architectures, such as recurrent and recursive neural networks have been successfully applied to various natural language processing tasks. Inspired by bidirectional recurrent neural networks which use representations that…

Machine Learning · Computer Science 2013-12-03 Ozan İrsoy , Claire Cardie

We discuss the connection between Matrix string theory and the DLCQ of string theory. Using this connection we describe the sense in which perturbative string amplitudes are reproduced in the Matrix string theory. Using recent realization…

High Energy Physics - Theory · Physics 2009-10-31 Gilad Lifschytz

We develop a rewriting theory suitable for diagrammatic algebras and lay down the foundations of a systematic study of their higher structures. In this paper, we focus on the question of finding bases. As an application, we give the first…

Representation Theory · Mathematics 2025-02-06 Léo Schelstraete

In this paper, we study how graph transformations based on sesqui-pushout rewriting can be reversed and how the composition of rewrites can be constructed. We illustrate how such reversibility and composition can be used to design an audit…

Logic in Computer Science · Computer Science 2020-12-04 Russ Harmer , Eugenia Oshurko

Algorithms to find optimal alignments among strings, or to find a parsimonious summary of a collection of strings, are well studied in a variety of contexts, addressing a wide range of interesting applications. In this paper, we consider…

Social and Information Networks · Computer Science 2020-11-09 Patty Commins , David Liben-Nowell , Tina Liu , Kiran Tomlinson

Directed acyclic graphs are a fundamental class of networks that includes citation networks, food webs, and family trees, among others. Here we define a random graph model for directed acyclic graphs and give solutions for a number of the…

Physics and Society · Physics 2009-03-23 Brian Karrer , M. E. J. Newman
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