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I introduce a formalism for representing the syntax of recursively structured graph-like patterns. It does not use production rules, like a conventional graph grammar, but represents the syntactic structure in a more direct and declarative…

Formal Languages and Automata Theory · Computer Science 2025-04-25 Peter Fletcher

Given graphs as input, Graph Neural Networks (GNNs) support the inference of nodes, edges, attributes, or graph properties. Graph Rewriting investigates the rule-based manipulation of graphs to model complex graph transformations. We…

Machine Learning · Computer Science 2023-05-31 Adam Machowczyk , Reiko Heckel

Applied category theory provides powerful mathematical tools for modelling processes and their composition. Symmetric monoidal categories, which involve series and parallel composition, are particularly well-suited for describing the…

Quantum Physics · Physics 2026-05-13 Muhammad Hamza Waseem

We generalize the problem of reconstructing strings from their substring compositions first introduced by Acharya et al. in 2015 motivated by polymer-based advanced data storage systems utilizing mass spectrometry. Namely, we see strings as…

Combinatorics · Mathematics 2025-04-02 Antoine Dailly , Tuomo Lehtilä

Graph-based semantic representations are valuable in natural language processing, where it is often simple and effective to represent linguistic concepts as nodes, and relations as edges between them. Several attempts has been made to find…

Formal Languages and Automata Theory · Computer Science 2021-05-10 Johanna Björklund , Frank Drewes , Anna Jonsson

A theory is developed which uses "networks" (directed acyclic graphs with some extra structure) as a formalism for expressions in multilinear algebra. It is shown that this formalism is valid for arbitrary PROPs (short for 'PROducts and…

Rings and Algebras · Mathematics 2012-04-12 Lars Hellström

Symmetric monoidal theories (SMTs) generalise algebraic theories in a way that make them suitable to express resource-sensitive systems, in which variables cannot be copied or discarded at will. In SMTs, traditional tree-like terms are…

Logic in Computer Science · Computer Science 2022-09-16 Filippo Bonchi , Fabio Gadducci , Aleks Kissinger , Pawel Sobocinski , Fabio Zanasi

String rewriting systems have proved very useful to study monoids. In good cases, they give finite presentations of monoids, allowing computations on those and their manipulation by a computer. Even better, when the presentation is…

Logic in Computer Science · Computer Science 2015-07-01 Samuel Mimram

We propose a novel structure, the data-sharing graph, for characterizing sharing patterns in large-scale data distribution systems. We analyze this structure in two such systems and uncover small-world patterns for data-sharing…

Networking and Internet Architecture · Computer Science 2007-05-23 Adriana Iamnitchi , Matei Ripeanu , Ian Foster

Graph rewrite formalisms are a powerful approach to modeling complex molecular systems. They capture the intrinsic concurrency of molecular interactions, thereby enabling a formal notion of mechanism (a partially ordered set of events) that…

Logic in Computer Science · Computer Science 2019-01-04 Ioana Cristescu , Walter Fontana , Jean Krivine

Equational reasoning with string diagrams provides an intuitive means of proving equations between morphisms in a symmetric monoidal category. This can be extended to proofs of infinite families of equations using a simple graphical syntax…

Category Theory · Mathematics 2015-05-05 Aleks Kissinger , David Quick

This document is an elementary introduction to string diagrams. It takes a computer science perspective: rather than using category theory as a starting point, we build on intuitions from formal language theory, treating string diagrams as…

Logic in Computer Science · Computer Science 2023-11-23 Robin Piedeleu , Fabio Zanasi

Graph rewriting is a popular tool for the optimisation and modification of graph expressions in domains such as compilers, machine learning and quantum computing. The underlying data structures are often port graphs - graphs with labels at…

Data Structures and Algorithms · Computer Science 2025-03-27 Luca Mondada , Pablo Andrés-Martínez

In category theory, the use of string diagrams is well known to aid in the intuitive understanding of certain concepts, particularly when dealing with adjunctions and monoidal categories. We show that string diagrams are also useful in…

Category Theory · Mathematics 2024-07-19 Kenji Nakahira

Process theories combine a graphical language for compositional reasoning with an underlying categorical semantics. They have been successfully applied to fields such as quantum computation, natural language processing, linear dynamical…

Logic in Computer Science · Computer Science 2018-05-17 Dan Marsden , Fabrizio Genovese

A string diagram is a two-dimensional graphical representation that can be described as a one-dimensional term generated from a set of primitives using sequential and parallel compositions. Since different syntactic terms may represent the…

Logic in Computer Science · Computer Science 2026-02-12 Julie Cailler , Noé Delorme , Simon Perdrix , Sophie Tourret

Critical pair analysis provides a convenient and computable criterion of confluence, which is a fundamental property in rewriting theory, for a wide variety of rewriting systems. Bonchi et al. showed validity of critical pair analysis for…

Category Theory · Mathematics 2026-03-11 Anna Matsui , Innocent Obi , Guillaume Sabbagh , Leo Torres , Diana Kessler , Juan F. Meleiro , Koko Muroya

Spin networks, essentially labeled graphs, are ``good quantum numbers'' for the quantum theory of geometry. These structures encompass a diverse range of techniques which may be used in the quantum mechanics of finite dimensional systems,…

General Relativity and Quantum Cosmology · Physics 2009-10-31 Seth A. Major

Feynman diagram expressions in ordinary field theories can be written in a string-like manner. The methods and the advantages for doing so are briefly discussed.

High Energy Physics - Theory · Physics 2009-09-25 C. S. Lam

The framework of causal models provides a principled approach to causal reasoning, applied today across many scientific domains. Here we present this framework in the language of string diagrams, interpreted formally using category theory.…

Logic in Computer Science · Computer Science 2023-04-18 Robin Lorenz , Sean Tull