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Clustering is part of unsupervised analysis methods that consist in grouping samples into homogeneous and separate subgroups of observations also called clusters. To interpret the clusters, statistical hypothesis testing is often used to…

Methodology · Statistics 2022-10-25 Benjamin Hivert , Denis Agniel , Rodolphe Thiébaut , Boris P Hejblum

Detecting butterfly hybrids requires knowledge of the parent subspecies, and the process can be tedious when encountering a new subspecies. This study focuses on a specific scenario where a model trained to recognize hybrid species A can…

Computational Engineering, Finance, and Science · Computer Science 2025-04-03 Bo-Kai Ruan , Yi-Zeng Fang , Hong-Han Shuai , Juinn-Dar Huang

After generalizing the concept of clusters to incorporate clusters that are linked to other clusters through some relatively narrow bridges, an approach for detecting patches of separation between these clusters is developed based on an…

Computer Vision and Pattern Recognition · Computer Science 2020-01-10 Luciano da F. Costa

This paper uses new and existing methods to study collective trends across countries throughout the pandemic, with a focus on the multivariate time series of reproduction numbers and vaccine proliferation. We begin with a time-varying…

Physics and Society · Physics 2023-10-16 Nick James , Max Menzies

Chronic viral infections can persist in an infected person for decades. From the perspective of the virus, a single infection can span thousands of generations, leading to a highly diverse population of viruses with its own complex…

Populations and Evolution · Quantitative Biology 2023-05-30 Dmitry Gromov , Ethan O. Romero-Severson

We analyze the time-series data for the onset of A(H1N1)v influenza pandemic in India during the period June 1- September 30, 2009. Using a variety of statistical fitting procedures, we obtain a robust estimate of the exponential growth…

Populations and Evolution · Quantitative Biology 2010-06-07 T. Jesan , Gautam I. Menon , Sitabhra Sinha

The accurate forecasting of infectious epidemic diseases such as influenza is a crucial task undertaken by medical institutions. Although numerous flu forecasting methods and models based mainly on historical flu activity data and online…

Machine Learning · Computer Science 2021-07-08 Taichi Murayama , Shoko Wakamiya , Eiji Aramaki

The test-negative design (TND) has become a standard approach to evaluate vaccine effectiveness against the risk of acquiring infectious diseases in real-world settings, such as Influenza, Rotavirus, Dengue fever, and more recently…

Methodology · Statistics 2023-03-09 Kendrick Qijun Li , Xu Shi , Wang Miao , Eric Tchetgen Tchetgen

The COVID-19 pandemic has presented unprecedented challenges worldwide, with its impact varying significantly across different geographic and socioeconomic contexts. This study employs a clustering analysis to examine the diversity of…

Computational Engineering, Finance, and Science · Computer Science 2024-08-06 Morteza Maleki

Viruses evolve in the background of host immune systems that exert selective pressure and drive viral evolutionary trajectories. This interaction leads to different evolutionary patterns in antigenic space. Examples observed in nature…

Populations and Evolution · Quantitative Biology 2020-11-20 Jacopo Marchi , Michael Lässig , Thierry Mora , Aleksandra M. Walczak

A model based on a thermodynamic approach is proposed for predicting the dynamics of communicable epidemics in a city, when the epidemic is governed by controlling efforts of multiple scales so that an entropy is associated with the system.…

Medical Physics · Physics 2013-10-01 W. B. Wang , Z. N. Wu , Z. M. Cao , R. F. Hu

A novel method, termed Reduced Dimensionality Cluster Identification, RDCI, is presented, for the identification and quantitative description of clusters formed by N objects in three dimensional space. The method consists of finding a path,…

Other Condensed Matter · Physics 2013-06-17 Theophanes Raptis , Vasilios Raptis

We consider the problem of detecting an epidemic in a population where individual diagnoses are extremely noisy. The motivation for this problem is the plethora of examples (influenza strains in humans, or computer viruses in smartphones,…

Social and Information Networks · Computer Science 2014-02-07 Eli A. Meirom , Chris Milling , Constantine Caramanis , Shie Mannor , Ariel Orda , Sanjay Shakkottai

Rapid identification of newly emerging or circulating viruses is an important first step toward managing the public health response to potential outbreaks. A portable virus capture device coupled with label-free Raman Spectroscopy holds the…

Background: There is limited information about the role of different age groups, particularly subgroups of school-age children and younger adults in propagating influenza epidemics. Methods: For a communicable disease outbreak, some…

Populations and Evolution · Quantitative Biology 2017-06-13 Edward Goldstein

A random network model which allows for tunable, quite general forms of clustering, degree correlation and degree distribution is defined. The model is an extension of the configuration model, in which stubs (half-edges) are paired to form…

Probability · Mathematics 2012-07-31 Frank Ball , Tom Britton , David Sirl

Clustering aims to divide a set of points into groups. The current paradigm assumes that the grouping is well-defined (unique) given the probability model from which the data is drawn. Yet, recent experiments have uncovered several…

Machine Learning · Statistics 2024-06-25 Mireille Boutin , Evzenie Coupkova

As part of a continuing study of the effect of cluster environment on the star formation properties of galaxies, we have undertaken an H-alpha objective prism survey of the nearby cluster, Abell 1060. We detect 33 galaxies in emission, 24…

Astrophysics · Physics 2009-10-30 S. M. Bennett , C. Moss

Not long ago primary census data became available to publicity. It opened qualitatively new perspectives not only for researchers in demography and sociology, but also for those people, who somehow face processes occurring in society. In…

Databases · Computer Science 2011-06-28 Oleg Chertov , Marharyta Aleksandrova

We present the results of our investigation on the phenomenon of mass segregation in young star clusters in the Magellanic Clouds. HST/WFPC2 observations on NGC 1818, NGC 2004 & NGC 2100 in the Large Magellanic Cloud and NGC 330 in the…

Astrophysics · Physics 2009-11-10 D. Gouliermis , S. C. Keller , M. Kontizas , E. Kontizas , I. Bellas-Velidis