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The \emph{longest common extension} (\emph{LCE}) problem is to preprocess a given string $w$ of length $n$ so that the length of the longest common prefix between suffixes of $w$ that start at any two given positions is answered quickly. In…

Data Structures and Algorithms · Computer Science 2017-02-27 Yuka Tanimura , Takaaki Nishimoto , Hideo Bannai , Shunsuke Inenaga , Masayuki Takeda

Based on the Breslauer-Italiano online suffix tree construction algorithm (2013) with double logarithmic worst-case guarantees on the update time per letter, we develop near-real-time algorithms for several classical problems on strings,…

Data Structures and Algorithms · Computer Science 2026-02-18 Dominik Köppl , Gregory Kucherov

In this paper, we show that the LZ77 factorization of a text T {\in\Sigma^n} can be computed in O(R log n) bits of working space and O(n log R) time, R being the number of runs in the Burrows-Wheeler transform of T reversed. For extremely…

Data Structures and Algorithms · Computer Science 2015-10-22 Nicola Prezza , Alberto Policriti

We describe a RAM algorithm computing all runs (maximal repetitions) of a given string of length $n$ over a general ordered alphabet in $O(n\log^{\frac{2}3} n)$ time and linear space. Our algorithm outperforms all known solutions working in…

Data Structures and Algorithms · Computer Science 2015-11-24 Dmitry Kosolobov

Compression is beneficial because it helps detract resource usage. It reduces data storage space as well as transmission traffic and improves web pages loading. Run-length coding (RLC) is a lossless data compression algorithm. Data are…

Data Structures and Algorithms · Computer Science 2016-11-30 Kaveh Geyratmand Haghighi , Mirkamal Mirnia , Ahmad Habibizad Navin

An LZ-like factorization of a string divides it into factors, each being either a single character or a copy of a preceding substring. While grammar-based compression schemes support efficient random access with space linear in the…

Data Structures and Algorithms · Computer Science 2026-01-22 Hiroki Shibata , Yuto Nakashima , Yutaro Yamaguchi , Shunsuke Inenaga

Relative Lempel-Ziv (RLZ) parsing is a dictionary compression method in which a string $S$ is compressed relative to a second string $R$ (called the reference) by parsing $S$ into a sequence of substrings that occur in $R$. RLZ is…

Data Structures and Algorithms · Computer Science 2022-08-25 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

We present an efficient algorithm for computing the LZ78 factorization of a text, where the text is represented as a straight line program (SLP), which is a context free grammar in the Chomsky normal form that generates a single string.…

Data Structures and Algorithms · Computer Science 2013-05-27 Hideo Bannai , Shunsuke Inenaga , Masayuki Takeda

In this paper, we propose a new \emph{dynamic compressed index} of $O(w)$ space for a dynamic text $T$, where $w = O(\min(z \log N \log^*M, N))$ is the size of the signature encoding of $T$, $z$ is the size of the Lempel-Ziv77 (LZ77)…

Data Structures and Algorithms · Computer Science 2016-07-20 Takaaki Nishimoto , Tomohiro I , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Much research has been devoted to optimizing algorithms of the Lempel-Ziv (LZ) 77 family, both in terms of speed and memory requirements. Binary search trees and suffix trees (ST) are data structures that have been often used for this…

Data Structures and Algorithms · Computer Science 2016-11-17 Artur Ferreira , Arlindo Oliveira , Mario Figueiredo

We present an algorithm that constructs the LZ-End parsing (a variation of LZ77) of a given string of length $n$ in $O(n\log\ell)$ expected time and $O(z + \ell)$ space, where $z$ is the number of phrases in the parsing and $\ell$ is the…

Data Structures and Algorithms · Computer Science 2020-12-15 Dominik Kempa , Dmitry Kosolobov

We present the first worst-case linear time algorithm that directly computes the parameterized suffix and LCP arrays for constant sized alphabets. Previous algorithms either required quadratic time or the parameterized suffix tree to be…

Data Structures and Algorithms · Computer Science 2019-06-04 Noriki Fujisato , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

The problem of constructing optimal factoring automata arises in the context of unification factoring for the efficient execution of logic programs. Given an ordered set of $n$ strings of length $m$, the problem is to construct a trie-like…

Data Structures and Algorithms · Computer Science 2024-04-04 Thomas Erlebach , Kleitos Papadopoulos

We present an algorithm for computing the Lyndon factorization of a string that is given in grammar compressed form, namely, a Straight Line Program (SLP). The algorithm runs in $O(n^4 + mn^3h)$ time and $O(n^2)$ space, where $m$ is the…

Data Structures and Algorithms · Computer Science 2013-04-29 Tomohiro I , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

We propose algorithms computing the semi-greedy Lempel-Ziv 78 (LZ78), the Lempel-Ziv Double (LZD), and the Lempel-Ziv-Miller-Wegman (LZMW) factorizations in linear time for integer alphabets. For LZD and LZMW, we additionally propose data…

Data Structures and Algorithms · Computer Science 2024-09-24 Dominik Köppl

We present the first linear time algorithm to construct the $2n$-bit version of the Lyndon array for a string of length $n$ using only $o(n)$ bits of working space. A simpler variant of this algorithm computes the plain ($n\lg n$-bit)…

Data Structures and Algorithms · Computer Science 2019-12-11 Philip Bille , Jonas Ellert , Johannes Fischer , Inge Li Gørtz , Florian Kurpicz , Ian Munro , Eva Rotenberg

This paper gives new results for synchronization strings, a powerful combinatorial object that allows to efficiently deal with insertions and deletions in various communication settings: $\bullet$ We give a deterministic, linear time…

Information Theory · Computer Science 2017-11-13 Bernhard Haeupler , Amirbehshad Shahrasbi

Given a string of length $n$ that is composed of $r$ runs of letters from the alphabet $\{0,1,\ldots,\sigma{-}1\}$ such that $2 \le \sigma \le r$, we describe a data structure that, provided $r \le n / \log^{\omega(1)} n$, stores the string…

Data Structures and Algorithms · Computer Science 2018-02-27 José Fuentes-Sepúlveda , Juha Kärkkäinen , Dmitry Kosolobov , Simon J. Puglisi

The notions of synchronizing and partitioning sets are recently introduced variants of locally consistent parsings with great potential in problem-solving. In this paper we propose a deterministic algorithm that constructs for a given…

Data Structures and Algorithms · Computer Science 2024-04-23 Dmitry Kosolobov , Nikita Sivukhin

Run Length Encoding(RLE) is one of the oldest algorithms for data-compression available, a method used for compression of large data into smaller and therefore more compact data. It compresses by looking at the data for repetitions of the…

Data Structures and Algorithms · Computer Science 2015-01-23 Meo Mespotine