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Related papers: Software Mutational Robustness

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In this paper, we propose shifting the focus of robustness evaluation for Neural Program Repair (NPR) techniques toward naturally-occurring data transformations. To accomplish this, we first examine the naturalness of semantic-preserving…

Software Engineering · Computer Science 2024-11-14 Thanh Le-Cong , Dat Nguyen , Bach Le , Toby Murray

Robustness, the insensitivity of some of a biological system's functionalities to a set of distinct conditions, is intimately linked to fitness. Recent studies suggest that it may also play a vital role in enabling the evolution of species.…

Adaptation and Self-Organizing Systems · Physics 2011-12-15 James M Whitacre , Axel Bender

When software evolves, opportunities for introducing faults appear. Therefore, it is important to test the evolved program behaviors during each evolution cycle. We conduct an exploratory study to investigate the properties of…

Software Engineering · Computer Science 2021-12-30 Milos Ojdanic , Ezekiel Soremekun , Renzo Degiovanni , Mike Papadakis , Yves Le Traon

Mutational robustness quantifies the effect of random mutations on fitness. When mutational robustness is high, most mutations do not change fitness or have only a minor effect on it. From the point of view of fitness landscapes, robust…

Populations and Evolution · Quantitative Biology 2019-10-22 Alexander Klug , Su-Chan Park , Joachim Krug

Robustness to genetic or environmental disturbances is often considered as a key property of living systems. Yet, in spite of being discussed since the 1950s, how robustness emerges from the complexity of genetic architectures and how it…

Populations and Evolution · Quantitative Biology 2022-03-31 Arnaud Le Rouzic

Conventional population genetics considers the evolution of a limited number of genotypes corresponding to phenotypes with different fitness. As model phenotypes, in particular RNA secondary structure, have become computationally tractable,…

Populations and Evolution · Quantitative Biology 2008-04-22 Gergely J. Szollosi , Imre Derenyi

The functioning of many biochemical networks is often robust -- remarkably stable under changes in external conditions and internal reaction parameters. Much recent work on robustness and evolvability has focused on the structure of neutral…

Quantitative Methods · Quantitative Biology 2011-03-15 Bryan C. Daniels , Yan-Jiun Chen , James P. Sethna , Ryan N. Gutenkunst , Christopher R. Myers

Due to the diffusion of IoT, modern software systems are often thought to control and coordinate smart devices in order to manage assets and resources, and to guarantee efficient behaviours. For this class of systems, which interact…

Logic in Computer Science · Computer Science 2024-02-14 Valentina Castiglioni , Michele Loreti , Simone Tini

The ability to absorb mutations while retaining structure and function, or mutational robustness, is a remarkable property of natural proteins. In this Letter, we use a computational model of organismic evolution [Zeldovich et al, PLOS Comp…

Biomolecules · Quantitative Biology 2008-06-25 Konstantin B. Zeldovich , Eugene I. Shakhnovich

Understanding how systems can be designed to be evolvable is fundamental to research in optimization, evolution, and complex systems science. Many researchers have thus recognized the importance of evolvability, i.e. the ability to find new…

Neural and Evolutionary Computing · Computer Science 2009-07-03 James M Whitacre , Axel Bender

Evolution on neutral networks of genotypes has been found in models to concentrate on genotypes with high mutational robustness, to a degree determined by the topology of the network. Here analysis is generalized beyond neutral networks to…

Populations and Evolution · Quantitative Biology 2015-09-01 Lee Altenberg

Nowadays, software has become a complex piece of work that may be beyond our control. Understanding how software evolves over time plays an important role in controlling software development processes. Recently, a few researchers found the…

Software Engineering · Computer Science 2008-08-26 Yutao Ma , Keqing He , Jing Liu

In this paper we apply mutation testing in an in-time fashion, i.e., across multiple project releases. Thus, we investigate how the mutants of the current version behave in the future versions of the programs. We study the characteristics…

Software Engineering · Computer Science 2025-01-06 Jeongju Sohn , Ezekiel Soremekun , Michail Papadakis

BACKGROUND: An important question is whether evolution favors properties such as mutational robustness or evolvability that do not directly benefit any individual, but can influence the course of future evolution. Functionally similar…

Populations and Evolution · Quantitative Biology 2009-04-16 Jesse D. Bloom , Zhongyi Lu , David Chen , Alpan Raval , Ophelia S. Venturelli , Frances H. Arnold

Mutation testing has been demonstrated to be one of the most powerful fault-revealing tools in the tester's tool kit. Much previous work implicitly assumed it to be sufficient to re-compute mutant suites per release. Sadly, this makes…

Software Engineering · Computer Science 2022-12-23 Milos Ojdanic , Mike Papadakis , Mark Harman

We introduce and analyze a general model of a population evolving over a network of selectively neutral genotypes. We show that the population's limit distribution on the neutral network is solely determined by the network topology and…

adap-org · Physics 2009-10-31 Erik van Nimwegen , James P. Crutchfield , Martijn Huynen

Mutation analysis assesses a test suite's adequacy by measuring its ability to detect small artificial faults, systematically seeded into the tested program. Mutation analysis is considered one of the strongest test-adequacy criteria.…

Software Engineering · Computer Science 2021-03-01 Goran Petrović , Marko Ivanković , Gordon Fraser , René Just

One of the characteristic features of genetic networks is their inherent robustness, that is, their ability to retain functionality in spite of the introduction of random errors. In this paper, we seek to better understand how robustness is…

Molecular Networks · Quantitative Biology 2009-04-29 Arnab Bhattacharyya , Bernhard Haeupler

Software code complexity is a well-studied property to determine software component health. However, the existing code complexity metrics do not directly take into account the fault-proneness aspect of the code. We propose a metric called…

Software Engineering · Computer Science 2021-04-27 Ali Parsai , Serge Demeyer

Previous evolutionary studies demonstrated how evaluating evolving agents in variable environmental conditions enable them to develop solutions that are robust to environmental variation. We demonstrate how the robustness of the agents can…

Neural and Evolutionary Computing · Computer Science 2018-03-05 Nicola Milano , Jônata Tyska Carvalho , Stefano Nolfi
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