English
Related papers

Related papers: A transferable ab-initio based force field for aqu…

200 papers

In this work, a force field for several ions in water is proposed. In particular, we consider the cations Li$^+$ , Na$^+$ , K$^+$, Mg$^{2+}$, Ca$^{2+}$ and the anions Cl$^-$, and SO$_4^{2-}$ . These ions were selected as they appear in the…

Chemical Physics · Physics 2024-01-25 I. M. Zeron , J. L. F. Abascal , C. Vega

Force field have for decades proven to be an indispensable tool for molecular simulations which are out of reach for ab-initio methods. Recent efforts to improve the accuracy of these simulations have focused on the inclusion of many-body…

Chemical Physics · Physics 2020-06-26 Ruben Goeminne , Toon Verstraelen

Abstract. Ionic liquids (ILs) constitute an emerging field of research. New ILs are continuously introduced involving more and more organic and inorganic ions. Amino acid based ILs (AAILs) represent a specific interest due to their…

Materials Science · Physics 2014-07-23 Eudes Eterno Fileti , Vitaly V. Chaban

The correct description of the ionic interaction and stable equilibrium of the simulations of biomolecular structure, dynamics, folding, catalysis, and function, an accurate model of the monovalent ions is very important. The force field…

Soft Condensed Matter · Physics 2016-11-16 Raul Fuentes-Azcatl , Marcia C. Barbosa

A new computational model for Sodium Chloride, the NaCl/{\epsilon}, is proposed. The Force Fields employed here for the description of the NaCl is based on a set of radial particle-particle pair potentials involving Lennard-Jones (LJ) and…

Soft Condensed Matter · Physics 2018-07-11 Raul Fuentes-Azcatl , Marcia C. Barbosa

Ionic liquids (ILs) constitute one of the most active fields of research nowadays. Many organic and inorganic molecules can be converted into ions via relatively simple procedures. These ions can be combined into ILs. Amino acid based ILs…

Materials Science · Physics 2015-01-09 Eudes Eterno Fileti , Vitaly V. Chaban

Accurate models of alkali and halide ions in aqueous solution are necessary for computer simulations of a broad variety of systems. Previous efforts to develop ion force fields have generally focused on reproducing experimental measurements…

Chemical Physics · Physics 2012-08-21 Albert H. Mao , Rohit V. Pappu

Given the piecewise approach to modeling intermolecular interactions for force fields, they can be difficult to parameterize since they are fit to data like total energies that only indirectly connect to their separable functional forms.…

Chemical Physics · Physics 2019-07-30 A. K. Das , L. Urban , I. Leven , M. Loipersberger , A. Aldossary , M. Head-Gordon , T. Head-Gordon

Polarizable force fields are gradually becoming a common choice for ionic soft matter, in particular for molecular dynamics (MD) simulations of ionic liquids (ILs) and deep eutectic solvents (DESs). The CL&Pol force field introduced in 2019…

Soft Condensed Matter · Physics 2021-09-30 Rafael Maglia de Souza , Mikko Karttunen , Mauro Carlos Costa Ribeiro

In this work we discuss the use of scaled charges when developing force fields for NaCl in water. We shall develop force fields for Na$^+$ and Cl$^-$ using the following values for the scaled charge (in electron units) : 0.75, 0.80, 0.85,…

Soft Condensed Matter · Physics 2025-12-30 S. Blazquez , M. M. Conde , C. Vega

In this work, an extension of the Madrid-2019 force field is presented. We have added the cations Rb + and Cs + and the anions F$^-$, Br$^-$ and I$^-$. These ions were the remaining alkaline and halogen ions not previously considered in the…

Chemical Physics · Physics 2024-01-23 Samuel Blazquez , Maria M. Conde , Jose L. F. Abascal , Carlos Vega

In this paper we compare different force fields that are widely used (Gromacs, Charmm-22/x-Plor, Charmm-27, Amber-1999, OPLS-AA) in biophysical simulations containing aqueous NaCl. We show that the uncertainties of the microscopic…

Chemical Physics · Physics 2007-05-23 Michael Patra , Mikko Karttunen

Tasker type III polar terminations of ionic crystals carry a net surface charge as well as a dipole moment and are fundamentally unstable. In contact with electrolytes, such polar surfaces can be stabilized by adsorption of counter ions…

Chemical Physics · Physics 2019-03-22 Thomas Sayer , Michiel Sprik , Chao Zhang

The dielectric properties of molecules or nanostructures are usually modified in a complex manner, when assembled into a condensed phase. We propose a first-principles method to compute polarizabilities of sub-entities of solids and…

Chemical Physics · Physics 2018-09-10 Ding Pan , Marco Govoni , Giulia Galli

Reliable force field (FF) is a central issue in successful prediction of physical chemical properties via computer simulations. Together with the original CL-P parameters, our force field fosters computational investigation of ionic…

Materials Science · Physics 2014-12-20 Vitaly Chaban , Julia Voroshylova

Although a great number of computational models of water are available today, the majority of current biological simulations are done with simple models, such as TIP3P and SPC, developed almost thirty years ago and only slightly modified…

Chemical Physics · Physics 2015-05-07 Igor Leontyev , Alexei Stuchebrukhov

We calculate the ion and composition distributions around colloid particles in an aqueous mixture, accounting for preferential adsorption, electrostatic interaction, selective solvation among ions and polar molecules, and…

Soft Condensed Matter · Physics 2011-11-04 Ryuichi Okamoto , Akira Onuki

A new empirical potential for efficient, large scale molecular dynamics simulation of water is presented. The HIPPO (Hydrogen-like Intermolecular Polarizable POtential) force field is based upon the model electron density of a hydrogen-like…

Chemical Physics · Physics 2021-09-30 Joshua A. Rackers , Roseane R. Silva , Zhi Wang , Jay W. Ponder

We apply relativistic many-body methods to compute static differential polarizabilities for transitions inside the ground-state hyperfine manifolds of monovalent atoms and ions. Knowing this transition polarizability is required in a number…

Atomic Physics · Physics 2011-07-13 V. A. Dzuba , V. V. Flambaum , K. Beloy , A. Derevianko

Interfacial polar molecules feature a strongly anisotropic response to applied electric field, favoring dipole orientations parallel to the interface. In water, in particular, this effect combines with generic orientational preferences…

Soft Condensed Matter · Physics 2017-02-08 Dusan Bratko , Christopher D. Daub , Alenka Luzar
‹ Prev 1 2 3 10 Next ›