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Related papers: Bio-Polymer Hairpin Loops Sustained by Polarons

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Synthetic and biological living polymers are self-assembling chains whose chain length distributions (CLDs) are dynamic. We show these dynamics are ultrasensitive: even a small perturbation (e.g. temperature jump) non-linearly distorts the…

Soft Condensed Matter · Physics 2009-11-07 Ben O'Shaughnessy , Dimitrios Vavylonis

Both animal and plant tissue exhibit a nonlinear rheological phenomenon known as compression stiffening, or an increase in moduli with increasing uniaxial compressive strain. Does such a phenomenon exist in single cells, which are the…

When materials are in the diffusive regime, i.e. when the scattering length is less than the sample size, charge transport is mediated by diffusons and cooperons. We argue that these charge carriers are not always spread out throughout the…

Mesoscale and Nanoscale Physics · Physics 2020-04-03 Vincent E. Sacksteder

The phase behaviour of a single large semiflexible polymer immersed in a suspension of spherical particles is studied. All interactions are simple excluded volume interactions and the diameter of the spherical particles is an order of…

Soft Condensed Matter · Physics 2009-10-30 Richard P. Sear

The formation of the electron-phonon induced bipolaron is shown to be feasible in organic semiconductors at the interface with dielectric gates due to the coupling of the carriers with interface vibrational modes and to the weak to…

Strongly Correlated Electrons · Physics 2015-11-26 C. A. Perroni , V. Cataudella

We investigate the effect of exciton coupling on the optical absorption spectrum of polymer molecules under conditions of strong inhomogeneous broadening. We demonstrate that the dependence of the maximum in the rescaled absorption spectrum…

Chemical Physics · Physics 2009-11-13 A. L. Burin , J. A. Dickman , D. B. Uskov , C. F. F. Hebbard , G. C. Schatz

The dynamics of elastocapillary thinning in high molecular weight polymer solutions are re-examined using high-speed digital video microscopy. At long times, the evolution of the viscoelastic thread deviates from self-similar exponential…

Other Condensed Matter · Physics 2009-11-11 Monica S. N. Oliveira , Gareth H. McKinley

The longitudinal response of single semiflexible polymers to sudden changes in externally applied forces is known to be controlled by the propagation and relaxation of backbone tension. Under many experimental circumstances, realized, e.g.,…

Soft Condensed Matter · Physics 2011-02-25 Florian Thüroff , Benedikt Obermayer , Erwin Frey

We present a model for semiflexible polymers in Hamiltonian formulation which interpolates between a Rouse chain and worm-like chain. Both models are realized as limits for the parameters. The model parameters can also be chosen to match…

Soft Condensed Matter · Physics 2015-06-12 Gerard T. Barkema , J. M. J. van Leeuwen

We investigate the electron (hole) transport through short double-stranded DNA wires in which the electrons are strongly coupled to the specific vibrational modes (vibrons) of the DNA. We analyze the problem starting from a tight-binding…

Mesoscale and Nanoscale Physics · Physics 2015-06-25 Benjamin B. Schmidt , Matthias H. Hettler , Gerd Schön

We develop a theoretical and computational framework to study polarons in semiconductors and insulators from first principles. Our approach provides the formation energy, excitation energy, and wavefunction of both electron and hole…

Materials Science · Physics 2019-06-21 Weng Hong Sio , Carla Verdi , Samuel Ponce , Feliciano Giustino

The classic model of eukaryotic gene expression requires direct spatial contact between a distal enhancer and a proximal promoter. Recent Chromosome Conformation Capture (3C) studies show that enhancers and promoters are embedded in a…

Genomics · Quantitative Biology 2014-11-25 Boryana Doyle , Geoffrey Fudenberg , Maxim Imakaev , Leonid A. Mirny

With the Su-Schrieffer-Heeger model involving the effects of solvent polarization and external electric field, we show that bipolaron maybe more stable than two polarons when a dication induced into a DNA stack. Under the high electric…

Soft Condensed Matter · Physics 2009-11-11 J. H. Wei , L. X. Wang , K. S. Chan , YiJing Yan

The high linear charge density of 20-base-pair oligomers of DNA is shown to lead to a striking non-monotonic dependence of the long-time self-diffusion on the concentration of the DNA in low-salt conditions. This generic non-monotonic…

Soft Condensed Matter · Physics 2009-11-13 M. G. McPhie , G. Naegele

Excitons consist of electrons and holes held together by their attractive Coulomb interaction. Although excitons are neutral excitations, spatial fluctuations in their charge density couple with the ions of the crystal lattice. This…

Materials Science · Physics 2024-01-18 Zhenbang Dai , Chao Lian , Jon Lafuente-Bartolome , Feliciano Giustino

The question of how stiff polymers are able to pack into small containers is particularly relevant to the study of DNA packaging in viruses. A reduced version of the problem based on coarse-grained representations of the main components of…

Biomolecules · Quantitative Biology 2016-10-12 D. C. Rapaport

The notion of S-stability of foliations on branched simple polyhedrons is introduced by R. Benedetti and C. Petronio in the study of characteristic foliations of contact structures on 3-manifolds. We additionally assume that the 1-form…

Geometric Topology · Mathematics 2020-05-29 Shin Handa , Masaharu Ishikawa

It is widely accepted that phonon-mediated high-temperature superconductivity is impossible at ambient pressure, because of the very large effective masses of polarons/bipolarons at strong electron-phonon coupling. Here we challenge this…

Superconductivity · Physics 2019-04-29 John Sous , Monodeep Chakraborty , Roman V. Krems , Mona Berciu

Intrinsically stable or `fundamental' solitons may be decorated with conserved charges which are pieces of those carried by elementary particles in the same medium. These `hairs' are always significant in principle, and in the…

High Energy Physics - Theory · Physics 2007-05-23 Alfred S. Goldhaber

Starting from the reported experimental evidence that the residence time of contacts between the ends of biopolymers is length dependent, we investigate the kinetics of contact breaking in simple polymer models from a theoretical point of…

Soft Condensed Matter · Physics 2024-12-19 E. Marchi , G. Tiana
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