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A speculative overview of a future topic of research. The paper is a collection of ideas concerning two related areas: 1) Graph computation machines ("computing with graphs"). This is the class of models of computation in which the state of…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Bayle Shanks

We study the problem of enumerating the $k$-arc-connected orientations of a graph $G$, i.e., generating each exactly once. A first algorithm using submodular flow optimization is easy to state, but intricate to implement. In a second…

Combinatorics · Mathematics 2020-07-29 Sarah Blind , Kolja Knauer , Petru Valicov

Real-world events exhibit a high degree of interdependence and connections, and hence data points generated also inherit the linkages. However, the majority of AI/ML techniques leave out the linkages among data points. The recent surge of…

Social and Information Networks · Computer Science 2020-06-17 Shrey Dabhi , Manojkumar Parmar

In this paper we introduce the first efficient external-memory algorithm to compute the bisimilarity equivalence classes of a directed acyclic graph (DAG). DAGs are commonly used to model data in a wide variety of practical applications,…

Data Structures and Algorithms · Computer Science 2018-03-05 Jelle Hellings , George H. L. Fletcher , Herman Haverkort

We show how to construct an overlay network of constant degree and diameter $O(\log n)$ in time $O(\log n)$ starting from an arbitrary weakly connected graph. We assume a synchronous communication network in which nodes can send messages to…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-28 Thorsten Götte , Kristian Hinnenthal , Christian Scheideler , Julian Werthmann

The structure of the network underlying many complex systems, whether artificial or natural, plays a significant role in how these systems operate. As a result, much emphasis has been placed on accurately describing networks using network…

Physics and Society · Physics 2015-03-29 Peter Overbury , Luc Berthouze

We present two algorithms for maintaining the topological order of a directed acyclic graph with n vertices, under an online edge insertion sequence of m edges. Efficient algorithms for online topological ordering have many applications,…

Data Structures and Algorithms · Computer Science 2007-11-05 Telikepalli Kavitha , Rogers Mathew

This paper introduces a parallel scheduling problem where a directed acyclic graph modeling $t$ tasks and their dependencies needs to be executed on $n$ unreliable workers. Worker $i$ executes task $j$ correctly with probability $p_{i,j}$.…

Data Structures and Algorithms · Computer Science 2007-05-23 Grzegorz Malewicz

Given a graph of which the n vertices form a regular two-dimensional grid, and in which each (possibly weighted and/or directed) edge connects a vertex to one of its eight neighbours, the following can be done in O(scan(n)) I/Os, provided M…

Data Structures and Algorithms · Computer Science 2012-11-12 Herman Haverkort

Understanding human motion behaviour is a critical task for several possible applications like self-driving cars or social robots, and in general for all those settings where an autonomous agent has to navigate inside a human-centric…

Computer Vision and Pattern Recognition · Computer Science 2020-10-26 Alessio Monti , Alessia Bertugli , Simone Calderara , Rita Cucchiara

We formalize the simplification of activity-on-edge graphs used for visualizing project schedules, where the vertices of the graphs represent project milestones, and the edges represent either tasks of the project or timing constraints…

Data Structures and Algorithms · Computer Science 2020-02-06 David Eppstein , Daniel Frishberg , Elham Havvaei

Gene Ontology (GO) is the primary gene function knowledge base that enables computational tasks in biomedicine. The basic element of GO is a term, which includes a set of genes with the same function. Existing research efforts of GO mainly…

Artificial Intelligence · Computer Science 2022-06-27 Fenglin Liu , Bang Yang , Chenyu You , Xian Wu , Shen Ge , Adelaide Woicik , Sheng Wang

Numerous social, medical, engineering and biological challenges can be framed as graph-based learning tasks. Here, we propose a new feature based approach to network classification. We show how dynamics on a network can be useful to reveal…

Machine Learning · Statistics 2017-06-01 Leonardo Gutierrez Gomez , Benjamin Chiem , Jean-Charles Delvenne

Many score-based active learning methods have been successfully applied to graph-structured data, aiming to reduce the number of labels and achieve better performance of graph neural networks based on predefined score functions. However,…

Machine Learning · Computer Science 2023-04-25 Yinchuan Li , Zhigang Li , Wenqian Li , Yunfeng Shao , Yan Zheng , Jianye Hao

We generalise the insertion into a binary heap to any directed acyclic graph (DAG) with one source vertex. This lets us formulate a general method for converting any such DAG into a data structure with priority queue interface. We apply our…

Data Structures and Algorithms · Computer Science 2017-10-04 Mikhail Gudim

We propose and systematically evaluate three strategies for training dynamically-routed artificial neural networks: graphs of learned transformations through which different input signals may take different paths. Though some approaches…

Machine Learning · Statistics 2017-09-14 Mason McGill , Pietro Perona

This report presents an algorithm to statically schedule live and strongly connected Marked Graphs (MG). The proposed algorithm computes the best execution where the execution rate is maximal and place sizes are minimal. The proposed…

Formal Languages and Automata Theory · Computer Science 2012-02-23 Jean-Vivien Millo , Robert De Simone

Directed acyclic graph (DAG) models are widely used to represent causal relationships among random variables in many application domains. This paper studies a special class of non-Gaussian DAG models, where the conditional variance of each…

Machine Learning · Statistics 2021-11-03 Wei Zhou , Xin He , Wei Zhong , Junhui Wang

We present a simple algorithm which maintains the topological order of a directed acyclic graph with n nodes under an online edge insertion sequence in O(n^{2.75}) time, independent of the number of edges m inserted. For dense DAGs, this is…

Data Structures and Algorithms · Computer Science 2007-05-23 Deepak Ajwani , Tobias Friedrich , Ulrich Meyer

We propose a new family of efficient and expressive deep generative models of graphs, called Graph Recurrent Attention Networks (GRANs). Our model generates graphs one block of nodes and associated edges at a time. The block size and…

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