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The present review is devoted to our recent studies on the excitonic motion in photosynthetic systems. In photosynthesis, the light photon is absorbed to create an exciton in the antenna complex of the photosynthetic pigments. This exciton…

Statistical Mechanics · Physics 2012-03-02 Navinder Singh

Is there a functional role for quantum mechanics or coherent quantum effects in biological processes? While this question is as old as quantum theory, only recently have measurements on biological systems on ultra-fast time-scales shed…

Biological Physics · Physics 2012-05-07 Neill Lambert , Yueh-Nan Chen , Yuan-Chung Cheng , Che-Ming Li , Guang-Yin Chen , Franco Nori

Biochemical oscillations are prevalent in living organisms. Systems with a small number of constituents cannot sustain coherent oscillations for an indefinite time because of fluctuations in the period of oscillation. We show that the…

Statistical Mechanics · Physics 2017-06-29 Andre C Barato , Udo Seifert

Living systems operate far from thermodynamic equilibrium. Enzymatic activity can induce broken detailed balance at the molecular scale. This molecular scale breaking of detailed balance is crucial to achieve biological functions such as…

Biological Physics · Physics 2018-05-02 F. Gnesotto , F. Mura , J. Gladrow , C. P. Broedersz

The observability of electronic coherence in electron transfer reactions is discussed. We show that under appropriate circumstances large-amplitude oscillations can be found in the electronic occupation probabilities. The initial…

Condensed Matter · Physics 2009-10-30 A. Lucke , C. H. Mak , R. Egger , J. Ankerhold , J. Stockburger , H. Grabert

The ability of many living systems to actively self-propel underlies critical biomedical, environmental, and industrial processes. While such active transport is well-studied in uniform settings, environmental complexities such as geometric…

Biological Physics · Physics 2021-08-23 Alejandro Martínez-Calvo , Carolina Trenado-Yuste , Sujit S. Datta

Recent experiments have used scattering to map the flow of electrons in a two-dimensional electron gas. Among other things, the data from these experiments show perseverance of regular interference fringes beyond the kinematic thermal…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 S. E. J. Shaw , R. Fleischmann , E. J. Heller

We study transfer of coherent nuclear oscillations between an excitation energy donor and an acceptor in a simple dimeric electronic system coupled to an unstructured thermodynamic bath and some pronounced vibrational intramolecular mode.…

Chemical Physics · Physics 2015-01-08 Tomáš Mančal , Jakub Dostál , Jakub Pšenčík , Donatas Zigmantas

Quantum mechanical phenomena, such as electronic coherence and entanglement, play a key role in achieving the unrivalled efficiencies of light-energy conversion in natural photosynthetic light-harvesting complexes, and triggered the growing…

Quantum Physics · Physics 2011-02-02 Richard Hildner , Daan Brinks , Niek F. van Hulst

Biological samples continuously emit ultra-weak photon emission (UPE, or "biophotons") which stems from electronic excited states generated chemically during oxidative metabolism and stress. Thus, UPE can potentially serve as a method for…

Biological Physics · Physics 2015-06-24 Michal Cifra , Christian Brouder , Michaela Nerudová , Ondřej Kučera

Under natural conditions, excitation of biological molecules, which display non-unitary open system dynamics, occurs via incoherent processes such as temperature changes or irradiation by sunlight/moonlight. The dynamics of such processes…

Quantum Physics · Physics 2013-02-11 Leonardo A. Pachon , Paul Brumer

We model the coherent energy transfer of an electronic excitation within covalently linked aromatic homodimers from first-principles, to answer whether the usual models of the bath calculated via detailed electronic structure calculations…

Chemical Physics · Physics 2015-06-03 John Parkhill , David Tempel , Alan Aspuru-Guzik

The onset of life is often framed around membrane bound compartments and encoded metabolism, leaving unresolved how spatial organization arose before stable boundaries. In this context, environmental gradients are usually treated as…

Other Quantitative Biology · Quantitative Biology 2026-04-23 Arturo Tozzi

Currently, molecular tunnel junctions are recognized as important active elements of various nanodevices. This gives a strong motivation to study physical mechanisms controlling electron transport through molecules. Electron motion through…

Mesoscale and Nanoscale Physics · Physics 2013-01-24 Natalya A. Zimbovskaya

Coherent superposition of electronic states, created by ionizing a molecule, can initiate ultrafast dynamics of the electron density. Correlation between nuclear and electron motions, however, typically dissipates the electronic coherence…

Quantum Physics · Physics 2025-08-15 Alan Scheidegger , Nikolay V. Golubev , Jiri J. L. Vanicek

Exposing a molecule to intense light pulses may bring this molecule to a nonstationary quantum state, thus launching correlated dynamics of electronic and nuclear subsystems. Although much had been achieved in the understanding of…

Chemical Physics · Physics 2024-04-11 Nikolay V. Golubev , Jiří Vaníček

We show that the coherence between different bacteriochlorophyll-a (BChla) sites in the Fenna-Mathews-Olson complex is an essential ingredient for excitation energy transfer between various sites. The coherence delocalizes the excitation…

Chemical Physics · Physics 2017-08-04 Davinder Singh , Shubhrangshu Dasgupta

Physical systems with co-existence and interplay of processes featuring distinct spatio-temporal scales are found in various research areas ranging from studies of brain activity to astrophysics. Complexity of such systems makes their…

Assessing the role of interference in natural and artificial quantum dyanamical processes is a crucial task in quantum information theory. To this aim, an appopriate formalism is provided by the decoherent histories framework. While this…

Quantum Physics · Physics 2016-04-13 Michele Allegra , Paolo Giorda , Seth Lloyd

Life is characterized by a myriad of complex dynamic processes allowing organisms to grow, reproduce, and evolve. Physical approaches for describing systems out of thermodynamic equilibrium have been increasingly applied to living systems,…

Biological Physics · Physics 2020-12-16 Xiaona Fang , Karsten Kruse , Ting Lu , Jin Wang