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In the early days of gene expression data, researchers have focused on gene-level analysis, and particularly on finding differentially expressed genes. This usually involved making a simplifying assumption that genes are independent, which…

Applications · Statistics 2021-06-29 Haim Bar , Seojin Bang

Unsupervised node clustering (or community detection) is a classical graph learning task. In this paper, we study algorithms, which exploit the geometry of the graph to identify densely connected substructures, which form clusters or…

Social and Information Networks · Computer Science 2023-07-20 Yu Tian , Zachary Lubberts , Melanie Weber

We introduce a new spectral method for image segmentation that incorporates long range relationships for global appearance modeling. The approach combines two different graphs, one is a sparse graph that captures spatial relationships…

Computer Vision and Pattern Recognition · Computer Science 2022-10-10 Jeova F. S. Rocha Neto , Pedro F. Felzenszwalb

This study introduces a novel approach for learning mixtures of Markov chains, a critical process applicable to various fields, including healthcare and the analysis of web users. Existing research has identified a clear divide in…

Machine Learning · Computer Science 2024-05-27 Fabian Spaeh , Konstantinos Sotiropoulos , Charalampos E. Tsourakakis

We present a novel methodology that combines graph and dense segmentation techniques by jointly learning both point and pixel contour representations, thereby leveraging the benefits of each approach. This addresses deficiencies in typical…

Computer Vision and Pattern Recognition · Computer Science 2024-02-20 Kit Mills Bransby , Greg Slabaugh , Christos Bourantas , Qianni Zhang

In order to develop reliable services using machine learning, it is important to understand the uncertainty of the model outputs. Often the probability distribution that the prediction target follows has a complex shape, and a mixture…

Machine Learning · Computer Science 2021-05-11 Ryuichi Kanoh , Tomu Yanabe

This paper introduces a new parsimonious structure for mixture of autoregressive models. the weighting coefficients are determined through latent random variables, following a hidden Markov model. We propose a dynamic programming algorithm…

Statistics Theory · Mathematics 2011-05-12 S. H. Alizadeh , S. Rezakhah

A variety of real-world tasks involve the classification of images into pre-determined categories. Designing image classification algorithms that exhibit robustness to acquisition noise and image distortions, particularly when the available…

Machine Learning · Statistics 2016-03-10 Umamahesh Srinivas

The problem of learning forest-structured discrete graphical models from i.i.d. samples is considered. An algorithm based on pruning of the Chow-Liu tree through adaptive thresholding is proposed. It is shown that this algorithm is both…

Information Theory · Computer Science 2011-02-15 Vincent Y. F. Tan , Animashree Anandkumar , Alan S. Willsky

We present an integrated approach for structure and parameter estimation in latent tree graphical models. Our overall approach follows a "divide-and-conquer" strategy that learns models over small groups of variables and iteratively merges…

Machine Learning · Computer Science 2019-12-19 Furong Huang , Niranjan U. N. , Ioakeim Perros , Robert Chen , Jimeng Sun , Anima Anandkumar

We consider the problem of jointly estimating a collection of graphical models for discrete data, corresponding to several categories that share some common structure. An example for such a setting is voting records of legislators on…

Applications · Statistics 2015-09-17 Jian Guo , Jie Cheng , Elizaveta Levina , George Michailidis , Ji Zhu

Real-world graph datasets often arise from mixtures of populations, where graphs are generated by multiple distinct underlying distributions. In this work, we propose a unified framework that explicitly models graph data as a mixture of…

Machine Learning · Computer Science 2026-04-01 Ali Azizpour , Reza Ramezanpour , Santiago Segarra

Tree-shaped graphical models are widely used for their tractability. However, they unfortunately lack expressive power as they require committing to a particular sparse dependency structure. We propose a novel class of generative models…

Machine Learning · Computer Science 2023-03-30 Nikil Roashan Selvam , Honghua Zhang , Guy Van den Broeck

Sampling uniform simple graphs with power-law degree distributions with degree exponent $\tau\in(2,3)$ is a non-trivial problem. We propose a method to sample uniform simple graphs that uses a constrained version of the configuration model…

Probability · Mathematics 2017-11-17 Tom Bannink , Remco van der Hofstad , Clara Stegehuis

We describe computationally efficient methods for learning mixtures in which each component is a directed acyclic graphical model (mixtures of DAGs or MDAGs). We argue that simple search-and-score algorithms are infeasible for a variety of…

Machine Learning · Computer Science 2015-05-19 Bo Thiesson , Christopher Meek , David Maxwell Chickering , David Heckerman

Graph learning problems are typically approached by focusing on learning the topology of a single graph when signals from all nodes are available. However, many contemporary setups involve multiple related networks and, moreover, it is…

Signal Processing · Electrical Eng. & Systems 2022-12-06 Samuel Rey , Madeline Navarro , Andrei Buciulea , Santiago Segarra , Antonio G. Marques

Bayesian inference for undirected graphical models is mostly restricted to the class of decomposable graphs, as they enjoy a rich set of properties making them amenable to high-dimensional problems. While parameter inference is…

Methodology · Statistics 2024-01-02 Mohamad Elmasri

We introduce a new graph polynomial that encodes interesting properties of graphs, for example, the number of matchings and the number of perfect matchings. Most importantly, for bipartite graphs the polynomial encodes the number of…

Discrete Mathematics · Computer Science 2010-02-10 Qi Ge , Daniel Stefankovic

The edge structure of the graph defining an undirected graphical model describes precisely the structure of dependence between the variables in the graph. In many applications, the dependence structure is unknown and it is desirable to…

Machine Learning · Statistics 2018-08-01 Marina Vinyes , Guillaume Obozinski

Probabilistic graphical models offer a powerful framework to account for the dependence structure between variables, which is represented as a graph. However, the dependence between variables may render inference tasks intractable. In this…