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Organismal phenotypes emerge from a complex set of genotypic interactions. While technological advances in sequencing provide a quantitative description of an organism's genotype, characterization of an organism's physical phenotype lags…

Biological Physics · Physics 2020-10-15 Vasyl Alba , James E. Carthew , Richard W. Carthew , Madhav Mani

Pragmatics and non-literal language understanding are essential to human communication, and present a long-standing challenge for artificial language models. We perform a fine-grained comparison of language models and humans on seven…

Computation and Language · Computer Science 2023-05-25 Jennifer Hu , Sammy Floyd , Olessia Jouravlev , Evelina Fedorenko , Edward Gibson

Complex systems, such as life and languages, are governed by principles of evolution. The analogy and comparison between biology and linguistics\cite{alphafold2, RoseTTAFold, lang_virus, cell language, faculty1, language of gene, Protein…

Populations and Evolution · Quantitative Biology 2026-03-18 Li-Min Wang , Hsing-Yi Lai , Sun-Ting Tsai , Chen Siang Ng , Kevin Sheng-Kai Ma , Shan-Jyun Wu , Meng-Xue Tsai , Yi-Ching Su , Daw-Wei Wang , Tzay-Ming Hong

Value trade-offs are an integral part of human decision-making and language use, however, current tools for interpreting such dynamic and multi-faceted notions of values in language models are limited. In cognitive science, so-called…

Computation and Language · Computer Science 2026-03-03 Sonia K. Murthy , Rosie Zhao , Jennifer Hu , Sham Kakade , Markus Wulfmeier , Peng Qian , Tomer Ullman

In this paper we provide a first analysis of the research questions that arise when dealing with the problem of communicating pieces of formal argumentation through natural language interfaces. It is a generally held opinion that formal…

Artificial Intelligence · Computer Science 2017-06-14 Federico Cerutti , Alice Toniolo , Timothy J. Norman

Human beings possess the most sophisticated computational machinery in the known universe. We can understand language of rich descriptive power, and communicate in the same environment with astonishing clarity. Two of the many contributors…

Computation and Language · Computer Science 2021-01-01 Karthikeya Ramesh Kaushik , Andrea E. Martin

From the earliest years of our lives, humans use language to express our beliefs and desires. Being able to talk to artificial agents about our preferences would thus fulfill a central goal of value alignment. Yet today, we lack…

Artificial Intelligence · Computer Science 2022-10-12 Theodore R Sumers , Robert D Hawkins , Mark K Ho , Thomas L Griffiths , Dylan Hadfield-Menell

Psycholinguistic studies of human word processing and lexical access provide ample evidence of the preferred nature of word-initial versus word-final segments, e.g., in terms of attention paid by listeners (greater) or the likelihood of…

Computation and Language · Computer Science 2021-02-04 Tiago Pimentel , Ryan Cotterell , Brian Roark

A dialogue act (DA) represents the meaning of an utterance at the illocutionary force level (Austin 1962) such as a question, a request, and a greeting. Since DAs take charge of the most fundamental part of communication, we believe that…

Artificial Intelligence · Computer Science 2022-10-04 Akane Matsushima , Ryosuke Kanajiri , Yusuke Hattori , Chie Fukada , Natsuki Oka

Background: Recent research in animal behaviour has contributed to determine how alignment, turning responses, and changes of speed mediate flocking and schooling interactions in different animal species. Here, we address specifically the…

Quantitative Methods · Quantitative Biology 2018-09-05 Andrea Perna , Guillaume Gregoire , Richard P. Mann

Zooplankton live in dynamic environments where turbulence may challenge their limited swimming abilities. How this interferes with fundamental behavioral processes remains elusive. We reconstruct simultaneously the trajectories of flow…

Fluid Dynamics · Physics 2020-12-03 François-Gaël Michalec , Itzhak Fouxon , Sami Souissi , Markus Holzner

What if the patterns hidden within dialogue reveal more about communication than the words themselves? We introduce Conversational DNA, a novel visual language that treats any dialogue -- whether between humans, between human and AI, or…

Human-Computer Interaction · Computer Science 2025-08-12 Baihan Lin

The puzzle associated with the cost of sex, an old problem of evolutionary biology, is discussed here from the point of view of nonequilibrium statistical mechanics. The results suggest, in a simplified model, that the prevalence of sexual…

Populations and Evolution · Quantitative Biology 2013-08-20 Renato Vieira dos Santos

Human language, music and a variety of animal vocalisations constitute ways of sonic communication that exhibit remarkable structural complexity. While the complexities of language and possible parallels in animal communication have been…

Computation and Language · Computer Science 2019-01-17 Willem Zuidema , Dieuwke Hupkes , Geraint Wiggins , Constance Scharff , Martin Rohrmeier

As general-purpose tools, Large Language Models (LLMs) must often reason about everyday physical environments. In a question-and-answer capacity, understanding the interactions of physical objects may be necessary to give appropriate…

Artificial Intelligence · Computer Science 2025-01-06 Matteo G. Mecattaf , Ben Slater , Marko Tešić , Jonathan Prunty , Konstantinos Voudouris , Lucy G. Cheke

Recent closed-source multimodal systems have made great advances, but their hidden language for understanding the world remains opaque because of their black-box architectures. In this paper, we use the systems' preference bias to study…

Computation and Language · Computer Science 2025-11-17 Juntu Zhao , Jialing Zhang , Chongxuan Li , Dequan Wang

In order for AI systems to communicate effectively with people, they must understand how we make decisions. However, people's decisions are not always rational, so the implicit internal models of human decision-making in Large Language…

Computation and Language · Computer Science 2025-03-11 Ryan Liu , Jiayi Geng , Joshua C. Peterson , Ilia Sucholutsky , Thomas L. Griffiths

Human communication is increasingly intermixed with language generated by AI. Across chat, email, and social media, AI systems suggest words, complete sentences, or produce entire conversations. AI-generated language is often not identified…

Computation and Language · Computer Science 2023-03-15 Maurice Jakesch , Jeffrey Hancock , Mor Naaman

Large Language Models (LLMs) have shown remarkable promise in communicating with humans. Their potential use as artificial partners with humans in sociological experiments involving conversation is an exciting prospect. But how viable is…

Artificial Intelligence · Computer Science 2025-02-04 James Flamino , Mohammed Shahid Modi , Boleslaw K. Szymanski , Brendan Cross , Colton Mikolajczyk

Human-to-human communications are enriched with affects and emotions, conveyed, and perceived through both verbal and nonverbal communication. It is our thesis that drone swarms can be used to communicate information enriched with effects…

Robotics · Computer Science 2020-07-14 Kasper Grispino , Damian Lyons , Truong-Huy Nguyen