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A review is given on the studies of formation of light clusters and heavier fragments in heavy-ion collisions at incident energies from several tens of MeV/nucleon to several hundred MeV/nucleon, focusing on dynamical aspects and on…

Nuclear Theory · Physics 2019-03-05 Akira Ono

To mimic the complex transport-like collective phenomena in a man-made or natural system, we study an open network junction model of totally asymmetric simple exclusion process with bulk particle attachment and detachment. The stationary…

Statistical Mechanics · Physics 2022-02-23 Ankita Gupta , Arvind Kumar Gupta

Nuclear pore complexes are constantly confronted by large fluxes of macromolecules and macromolecular complexes that need to get into and out of the nucleus. Such bi-directional traffic occurring in a narrow channel can easily lead to…

Biological Physics · Physics 2008-07-22 Ruti Kapon , Alon Topchik , David Mukamel , and Ziv Reich

Percolation on networks is a common framework to model a wide range of processes, from cascading failures to epidemic spreading. Standard percolation assumes short-range interactions, implying that nodes can merge into clusters only if they…

Statistical Mechanics · Physics 2024-05-01 Lorenzo Cirigliano , Giulio Cimini , Romualdo Pastor-Satorras , Claudio Castellano

A common feature of biological networks is the geometric property of self-similarity. Molecular regulatory networks through to circulatory systems, nervous systems, social systems and ecological trophic networks, show self-similar…

Molecular Networks · Quantitative Biology 2012-03-09 Simon DeDeo , David C. Krakauer

Clustering $\unicode{x2013}$ the tendency for neighbors of nodes to be connected $\unicode{x2013}$ quantifies the coupling of a complex network to its latent metric space. In random geometric graphs, clustering undergoes a continuous phase…

Physics and Society · Physics 2022-11-22 Jasper van der Kolk , M. Ángeles Serrano , Marián Boguñá

Multiplex networks consist of a fixed set of nodes connected by several sets of edges which are generated separately and correspond to different networks ("layers"). Here, a simple variant of the Ising model on multiplex networks with two…

Statistical Mechanics · Physics 2018-01-17 Andrzej Krawiecki

A general scheme for detecting and analyzing topological patterns in large complex networks is presented. In this scheme the network in question is compared with its properly randomized version that preserves some of its low-level…

Statistical Mechanics · Physics 2008-03-25 Sergei Maslov , Kim Sneppen , Alexei Zaliznyak

The discovery of nontrivial topology in quantum critical states has introduced a new paradigm for classifying quantum phase transitions and challenges the conventional belief that topological phases are typically associated with a bulk…

A large number of complex systems, naturally emerging in various domains, are well described by directed networks, resulting in numerous interesting features that are absent from their undirected counterparts. Among these properties is a…

Physics and Society · Physics 2021-05-19 Joseph D. O'Brien , Kleber A. Oliveira , James P. Gleeson , Malbor Asllani

The percolation properties of clustered networks are analyzed in detail. In the case of weak clustering, we present an analytical approach that allows to find the critical threshold and the size of the giant component. Numerical simulations…

Disordered Systems and Neural Networks · Physics 2009-11-11 M. Angeles Serrano , Marian Boguna

Complex networks have certain properties that distinguish them from their respective uniform or regular counterparts. One of these properties is the variation of topological properties along different hierarchical levels. In this work, we…

Pattern Formation and Solitons · Physics 2023-06-19 Alexandre Benatti , Luciano da Fontoura Costa

Higher-order connectivity patterns such as small induced sub-graphs called graphlets (network motifs) are vital to understand the important components (modules/functional units) governing the configuration and behavior of complex networks.…

Social and Information Networks · Computer Science 2020-09-15 Aldo G. Carranza , Ryan A. Rossi , Anup Rao , Eunyee Koh

The dynamics of diffusion in complex networks are widely studied to understand how entities, such as information, diseases, or behaviors, spread in an interconnected environment. Complex networks often present community structure, and tools…

Physics and Society · Physics 2025-12-09 Alina Dubovskaya , Caroline B. Pena , David J. P. O'Sullivan

The classical nucleation theory for homogeneous nucleation is formulated as a theory for a density fluctuation in a supersaturated gas at a given temperature. But Molecular Dynamics simulations reveal that it is small cold clusters which…

Other Condensed Matter · Physics 2015-10-28 Søren Toxvaerd

We present an analysis of the topologies of a class of networks which are optimal in terms of the requirements of having as short a route as possible between any two nodes while yet keeping the congestion in the network as low as possible.…

Statistical Mechanics · Physics 2009-11-10 Vittoria Colizza , Jayanth R. Banavar , Amos Maritan , Andrea Rinaldo

The spontaneous formation and subsequent growth, dissolution, merger and competition of social groups bears similarities to physical phase transitions in metastable finite systems. We examine three different scenarios, percolation, spinodal…

Physics and Society · Physics 2022-09-22 Frank Schweitzer , Georges Andres

Community structures have been identified in various complex real-world networks, for example, communication, information, internet and shareholder networks. The scaling of community size distribution indicates the heterogeneity in the…

Physics and Society · Physics 2022-07-11 Qing Yao , Bingsheng Chen , Tim S. Evans , Kim Christensen

A fundamental property of complex networks is the tendency for edges to cluster. The extent of the clustering is typically quantified by the clustering coefficient, which is the probability that a length-2 path is closed, i.e., induces a…

Social and Information Networks · Computer Science 2018-05-23 Hao Yin , Austin R. Benson , Jure Leskovec

Topological landscape is introduced for networks with functions defined on the nodes. By extending the notion of gradient flows to the network setting, critical nodes of different indices are defined. This leads to a concise and…

Methodology · Statistics 2012-05-01 E. Weinan , Jianfeng Lu , Yuan Yao
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