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Related papers: Semi-Quantitative Group Testing

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We propose a novel group testing method, termed semi-quantitative group testing, motivated by a class of problems arising in genome screening experiments. Semi-quantitative group testing (SQGT) is a (possibly) non-binary pooling scheme that…

Information Theory · Computer Science 2015-05-28 Amin Emad , Olgica Milenkovic

Semiquantitative group testing (SQGT) is a pooling method in which the test outcomes represent bounded intervals for the number of defectives. Alternatively, it may be viewed as an adder channel with quantized outputs. SQGT represents a…

Information Theory · Computer Science 2021-02-10 Mahdi Cheraghchi , Ryan Gabrys , Olgica Milenkovic

We analyze a new group testing scheme, termed semi-quantitative group testing, which may be viewed as a concatenation of an adder channel and a discrete quantizer. Our focus is on non-uniform quantizers with arbitrary thresholds. For the…

Information Theory · Computer Science 2015-06-26 Amin Emad , Olgica Milenkovic

Pathogenic infections pose a significant threat to global health, affecting millions of people every year and presenting substantial challenges to healthcare systems worldwide. Efficient and timely testing plays a critical role in disease…

Quantitative Methods · Quantitative Biology 2023-08-03 Ananthan Nambiar , Chao Pan , Vishal Rana , Mahdi Cheraghchi , João Ribeiro , Sergei Maslov , Olgica Milenkovic

In this paper, we introduce a variation of the group testing problem capturing the idea that a positive test requires a combination of multiple ``types'' of item. Specifically, we assume that there are multiple disjoint \emph{semi-defective…

Information Theory · Computer Science 2024-05-10 Thach V. Bui , Jonathan Scarlett

We describe a generalization of the group testing problem termed symmetric group testing. Unlike in classical binary group testing, the roles played by the input symbols zero and one are "symmetric" while the outputs are drawn from a…

Information Theory · Computer Science 2011-08-16 Amin Emad , Jun Shen , Olgica Milenkovic

This paper considers the problem of Quantitative Group Testing (QGT) where there are some defective items among a large population of $N$ items. We consider the scenario in which each item is defective with probability $K/N$, independently…

Information Theory · Computer Science 2019-10-16 Esmaeil Karimi , Fatemeh Kazemi , Anoosheh Heidarzadeh , Krishna R. Narayanan , Alex Sprintson

The Quantitative Group Testing (QGT) is about learning a (hidden) subset $K$ of some large domain $N$ using a sequence of queries, where a result of a query provides information about the size of the intersection of the query with the…

Data Structures and Algorithms · Computer Science 2022-04-22 Dariusz R. Kowalski , Dominik Pajak

The principal goal of Group Testing (GT) is to identify a small subset of "defective" items from a large population, by grouping items into as few test pools as possible. The test outcome of a pool is positive if it contains at least one…

Information Theory · Computer Science 2020-08-13 Alejandro Cohen , Asaf Cohen , Omer Gurewitz

Motivated by testing for pathogenic diseases we consider a new nonadaptive group testing problem for which: (1) positives occur within a burst, capturing the fact that infected test subjects often come in clusters, and (2) that the test…

Information Theory · Computer Science 2023-04-05 Yun-Han Li , Ryan Gabrys , Jin Sima , Ilan Shomorony , Olgica Milenkovic

This paper considers the problem of Quantitative Group Testing (QGT). Consider a set of $N$ items among which $K$ items are defective. The QGT problem is to identify (all or a sufficiently large fraction of) the defective items, where the…

Information Theory · Computer Science 2019-04-25 Esmaeil Karimi , Fatemeh Kazemi , Anoosheh Heidarzadeh , Krishna R. Narayanan , Alex Sprintson

In group testing, simple binary-output tests are designed to identify a small number $t$ of defective items that are present in a large population of $N$ items. Each test takes as input a group of items and produces a binary output…

Information Theory · Computer Science 2017-04-11 Alexander Barg , Arya Mazumdar

In this paper, combinatorial quantitative group testing (QGT) with noisy measurements is studied. The goal of QGT is to detect defective items from a data set of size $n$ with counting measurements, each of which counts the number of…

Information Theory · Computer Science 2022-02-01 Yun-Han Li , I-Hsiang Wang

The motivation for this paper comes from the ongoing SARS-CoV-2 Pandemic. Its goal is to present a previously neglected approach to non-adaptive group testing and describes it in terms of residuated pairs on partially ordered sets. Our…

Other Statistics · Statistics 2022-02-15 Marcus Greferath , Cornelia Roessing

Let $1 \le s < t$, $N \ge 1$ be integers and a complex electronic circuit of size $t$ is said to be an $s$-active, $\; s \ll t$, and can work as a system block if not more than $s$ elements of the circuit are defective. Otherwise, the…

Information Theory · Computer Science 2016-07-05 A. G. D'yachkov , I. V. Vorobyev , N. A. Polyanskii , V. Yu. Shchukin

In this paper we study a new, generalized version of the well-known group testing problem. In the classical model of group testing we are given n objects, some of which are considered to be defective. We can test certain subsets of the…

Combinatorics · Mathematics 2012-04-09 Dániel Gerbner , Balázs Keszegh , Dömötör Pálvölgyi , Gábor Wiener

We consider a new group testing model wherein each item is a binary random variable defined by an a priori probability of being defective. We assume that each probability is small and that items are independent, but not necessarily…

Information Theory · Computer Science 2018-07-24 Tongxin Li , Chun Lam Chan , Wenhao Huang , Tarik Kaced , Sidharth Jaggi

Let $1 \le s < t$, $N \ge 1$ be integers and a complex electronic circuit of size $t$ is said to be an $s$-active, $\; s \ll t$, and can work as a system block if not more than $s$ elements of the circuit are defective. Otherwise, the…

Information Theory · Computer Science 2016-01-26 A. G. D'yachkov , I. V. Vorobyev , N. A. Polyanskii , V. Yu. Shchukin

In group testing, the task is to determine the distinguished members of a set of objects L by asking subset queries of the form ``does the subset Q of L contain a distinguished object?'' The primary biological application of group testing…

Combinatorics · Mathematics 2008-02-03 Emanuel Knill , S. Muthukrishnan

We formulate and analyze a stochastic threshold group testing problem motivated by biological applications. Here a set of $n$ items contains a subset of $d \ll n$ defective items. Subsets (pools) of the $n$ items are tested -- the test…

Information Theory · Computer Science 2013-04-25 Chun Lam Chan , Sheng Cai , Mayank Bakshi , Sidharth Jaggi , Venkatesh Saligrama
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