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Boolean networks have been used successfully in modeling biological networks and provide a good framework for theoretical analysis. However, the analysis of large networks is not trivial. In order to simplify the analysis of such networks,…

Molecular Networks · Quantitative Biology 2013-11-29 Alan Veliz-Cuba , Reinhard Laubenbacher , Boris Aguilar

We present a rigorous mathematical framework for analyzing dynamics of a broad class of Boolean network models. We use this framework to provide the first formal proof of many of the standard critical transition results in Boolean network…

Disordered Systems and Neural Networks · Physics 2016-08-30 C. Seshadhri , Yevgeniy Vorobeychik , Jackson R. Mayo , Robert C. Armstrong , Joseph R. Ruthruff

Temporal dynamics, characterised by time-varying degree heterogeneity and homophily effects, are often exhibited in many real-world networks. As observed in an MIT Social Evolution study, the in-degree and out-degree of the nodes show…

Methodology · Statistics 2025-07-29 Yuguo Chen , Lianqiang Qu , Jinfeng Xu , Ting Yan , Yunpeng Zhou

We provide the first classification of different types of Random Boolean Networks (RBNs). We study the differences of RBNs depending on the degree of synchronicity and determinism of their updating scheme. For doing so, we first define…

Computational Complexity · Computer Science 2007-05-23 Carlos Gershenson

It has been proposed that adaptation in complex systems is optimized at the critical boundary between ordered and disordered dynamical regimes. Here, we review models of evolving dynamical networks that lead to self-organization of network…

Adaptation and Self-Organizing Systems · Physics 2008-11-07 Thimo Rohlf , Stefan Bornholdt

A model of Boolean game with only one free parameter $p$ that denotes the strength of herd behavior is proposed where each agent acts according to the information obtained from his neighbors in network and those in the minority are…

Statistical Mechanics · Physics 2007-05-23 Tao Zhou , Bing-Hong Wang , Pei-Ling Zhou , Chun-Xia Yang , Jun Liu

Consider a large Boolean network with a feed forward structure. Given a probability distribution on the inputs, can one find, possibly small, collections of input nodes that determine the states of most other nodes in the network? To answer…

Information Theory · Computer Science 2013-05-23 Reinhard Heckel , Steffen Schober , Martin Bossert

Threats on the stability of a financial system may severely affect the functioning of the entire economy, and thus considerable emphasis is placed on the analyzing the cause and effect of such threats. The financial crisis in the current…

Risk Management · Quantitative Finance 2014-10-28 Piotr Berman , Bhaskar DasGupta , Lakshmi Kaligounder , Marek Karpinski

The possibility to identify the nature (e.g. random or scale free) of complex networks while performing respective random walks is investigated with respect to autonomous agents based on Bayesian decision theory and humans navigating…

Computational Physics · Physics 2007-05-23 Filipi Nascimento Silva , Luciano da Fontoura Costa

Learning the structure of Bayesian networks from data provides insights into underlying processes and the causal relationships that generate the data, but its usefulness depends on the homogeneity of the data population, a condition often…

We investigate notions of network centrality in terms of the underlying coupling graph of the network, structure of exogenous uncertainties, and communication time-delay. Our focus is on time-delay linear consensus networks, where…

Systems and Control · Computer Science 2019-02-25 Yaser Ghaedsharaf , Milad Siami , Christoforos Somarakis , Nader Motee

Random Boolean networks (RBNs) are frequently employed for modelling complex systems driven by information processing, e.g. for gene regulatory networks (GRNs). Here we propose a hierarchical adaptive RBN (HARBN) as a system consisting of…

Physics and Society · Physics 2016-03-23 Piotr J. Gorski , Agnieszka Czaplicka , Janusz A. Holyst

This paper introduces a general theoretical framework to analyze noise limited networks. More precisely, we consider two homogenous Poisson point processes of base stations and users. General model of radio signal propagation and effect of…

Probability · Mathematics 2010-12-13 Laurent Decreusefond , Philippe Martins , Thanh-Tung Vu

Biological systems, from a cell to the human brain, are inherently complex. A powerful representation of such systems, described by an intricate web of relationships across multiple scales, is provided by complex networks. Recently, several…

Quantitative Methods · Quantitative Biology 2018-02-06 M. De Domenico

Boolean networks, widely used to model gene regulation, exhibit a phase transition between regimes in which small perturbations either die out or grow exponentially. We show and numerically verify that this phase transition in the dynamics…

Statistical Mechanics · Physics 2013-05-30 Shane Squires , Edward Ott , Michelle Girvan

Continuous-time systems with switch-like behaviour occur in chemical kinetics, gene regulatory networks and neural networks. Networks with hard switching, as a limiting case of smooth sigmoidal switching, retain the richest possible range…

Dynamical Systems · Mathematics 2019-05-10 Roderick Edwards

As multi-agent networks grow in size and scale, they become increasingly difficult to synchronize, though agents must work together even when generating and sharing different information at different times. Targeting such cases, this paper…

Optimization and Control · Mathematics 2018-09-18 Stefan Hochhaus , Matthew Hale

Complexity is an important metric for appropriate characterization of different classes of irregular signals, observed in the laboratory or in nature. The literature is already rich in the description of such measures using a variety of…

It is not obvious what fraction of all the potential information residing in the molecules and structures of living systems is significant or meaningful to the system. Sets of random sequences or identically repeated sequences, for example,…

Information Theory · Computer Science 2008-01-28 David J. Galas , Matti Nykter , Gregory W. Carter , Nathan D. Price , Ilya Shmulevich

We study classes of dynamical systems that can be obtained by constructing recursive networks with monotone Boolean functions. Stack filters in nonlinear signal processing are special cases of such systems. We show an analytical connection…

Disordered Systems and Neural Networks · Physics 2009-07-28 Matti Nykter , Juha Kesseli , Ilya Shmulevich
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