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The principle that research output should be open has, in recent years, been in-creasingly applied to data and software. Licensing is a key aspect to openness. Navi-gating the landscape of open source licenses can lead to complex…

Instrumentation and Methods for Astrophysics · Physics 2020-12-25 Y. G. Grange , T. Jürges , J. Schnabel , N. P. F. Lorente , M. Füßling

Background: Everything as Code (EaC) is an emerging paradigm aiming to codify all aspects of modern software systems. Despite its growing popularity, comprehensive industry standards and peer-reviewed research clarifying its scope and…

Software Engineering · Computer Science 2025-07-08 Haoran Wei , Nazim Madhavji , John Steinbacher

In this paper we present a number of metrics for usage of the SAO/NASA Astrophysics Data System (ADS). Since the ADS is used by the entire astronomical community, these are indicative of how the astronomical literature is used. We will show…

Large language models trained on source code can support a variety of software development tasks, such as code recommendation and program repair. Large amounts of data for training such models benefit the models' performance. However, the…

Software Engineering · Computer Science 2023-07-06 Max Hort , Anastasiia Grishina , Leon Moonen

A large number of computational scientific research projects make use of open source software packages. However, the development process of such tools frequently differs from conventional software development; partly because of the nature…

Software Engineering · Computer Science 2013-09-24 Ivan Girotto , Axel Kohlmeyer , David Grellscheid , Shawn T. Brown

Computational biology continues to spread into new fields, becoming more accessible to researchers trained in the wet lab who are eager to take advantage of growing datasets, falling costs, and novel assays that present new opportunities…

Other Quantitative Biology · Quantitative Biology 2024-01-09 Richard J. Abdill , Emma Talarico , Laura Grieneisen

Astrophysics papers often rely on software which may or may not be available, and URLs are often used as proxy citations for software and data. We extracted all URLs from two journals' 2015 research articles, removed those from certain…

Instrumentation and Methods for Astrophysics · Physics 2019-03-22 P. Wesley Ryan , Alice Allen , Peter Teuben

We present a list of 130 Galactic Open Clusters, found in the All-Sky Compiled Catalogue of 2.5 Million Stars (ASCC-2.5). For these clusters we determined and publish a homogeneous set of astrophysical parameters such as size, membership,…

Astrophysics · Physics 2016-08-16 N. V. Kharchenko , A. E. Piskunov , S. Röser , E. Schilbach , R. -D. Scholz

Modern astronomical surveys are producing datasets of unprecedented size and richness, increasing the potential for high-impact scientific discovery. This possibility, coupled with the challenge of exploring a large number of sources, has…

Instrumentation and Methods for Astrophysics · Physics 2024-04-01 Verlon Etsebeth , Michelle Lochner , Mike Walmsley , Margherita Grespan

We present the open source Astrophysical Multi-purpose Software Environment (AMUSE, www.amusecode.org), a component library for performing astrophysical simulations involving different physical domains and scales. It couples existing codes…

Instrumentation and Methods for Astrophysics · Physics 2015-06-16 F. I. Pelupessy , A. van Elteren , N. de Vries , S. L. W. McMillan , N. Drost , S. F. Portegies Zwart

The past year has seen movement on several fronts for improving software citation, including the Center for Open Science's Transparency and Openness Promotion (TOP) Guidelines, the Software Publishing Special Interest Group that was started…

We provide a description of the code implementation and structure of Cosmology Likelihood for Observables in Euclid (CLOE), developed by members of the Euclid Consortium. CLOE is a modular Python code for computing the theoretical…

Cosmology and Nongalactic Astrophysics · Physics 2026-05-11 Euclid Collaboration , S. Joudaki , V. Pettorino , L. Blot , M. Bonici , S. Camera , G. Cañas-Herrera , V. F. Cardone , P. Carrilho , S. Casas , S. Davini , S. Di Domizio , S. Farrens , L. W. K. Goh , S. Gouyou Beauchamps , S. Ilić , F. Keil , A. M. C. Le Brun , M. Martinelli , C. Moretti , A. Pezzotta , Z. Sakr , A. G. Sánchez , D. Sciotti , K. Tanidis , I. Tutusaus , V. Ajani , S. Alvi , M. Crocce , A. C. Deshpande , A. Fumagalli , C. Giocoli , A. G. Ferrari , R. Kou , L. Legrand , M. Lembo , G. F. Lesci , D. Navarro-Gironés , A. Nouri-Zonoz , S. Pamuk , L. Pagano , M. Tsedrik , S. Arcari , E. Artis , M. Ballardini , J. Bel , C. Carbone , M. Costanzi , B. De Caro , C. A. J. Duncan , G. Fabbian , M. Kilbinger , T. Kitching , F. Lacasa , M. Lattanzi , J. Olivares-Miranda , L. Salvati , D. Sapone , B. Sartoris , E. Sellentin , P. L. Taylor , B. Altieri , A. Amara , L. Amendola , S. Andreon , N. Auricchio , C. Baccigalupi , M. Baldi , S. Bardelli , P. Battaglia , A. Biviano , D. Bonino , E. Branchini , M. Brescia , J. Brinchmann , A. Caillat , V. Capobianco , J. Carretero , M. Castellano , G. Castignani , S. Cavuoti , K. C. Chambers , A. Cimatti , C. Colodro-Conde , G. Congedo , C. J. Conselice , L. Conversi , Y. Copin , F. Courbin , H. M. Courtois , A. Da Silva , H. Degaudenzi , S. de la Torre , G. De Lucia , A. M. Di Giorgio , H. Dole , F. Dubath , X. Dupac , S. Dusini , A. Ealet , S. Escoffier , M. Farina , R. Farinelli , F. Faustini , S. Ferriol , F. Finelli , P. Fosalba , S. Fotopoulou , N. Fourmanoit , M. Frailis , E. Franceschi , M. Fumana , S. Galeotta , K. George , W. Gillard , B. Gillis , J. Gracia-Carpio , B. R. Granett , A. Grazian , F. Grupp , L. Guzzo , S. V. H. Haugan , H. Hoekstra , W. Holmes , I. Hook , F. Hormuth , A. Hornstrup , P. Hudelot , K. Jahnke , M. Jhabvala , E. Keihänen , S. Kermiche , A. Kiessling , B. Kubik , K. Kuijken , M. Kümmel , M. Kunz , H. Kurki-Suonio , S. Ligori , P. B. Lilje , V. Lindholm , I. Lloro , G. Mainetti , D. Maino , E. Maiorano , O. Mansutti , O. Marggraf , N. Martinet , F. Marulli , R. Massey , S. Maurogordato , H. J. McCracken , E. Medinaceli , S. Mei , Y. Mellier , M. Meneghetti , E. Merlin , G. Meylan , A. Mora , M. Moresco , L. Moscardini , S. Mourre , E. Munari , R. Nakajima , C. Neissner , S. -M. Niemi , J. W. Nightingale , C. Padilla , S. Paltani , F. Pasian , K. Pedersen , W. J. Percival , S. Pires , G. Polenta , M. Poncet , L. A. Popa , L. Pozzetti , F. Raison , R. Rebolo , A. Renzi , J. Rhodes , G. Riccio , E. Romelli , M. Roncarelli , R. Saglia , J. A. Schewtschenko , M. Schirmer , P. Schneider , T. Schrabback , A. Secroun , E. Sefusatti , G. Seidel , M. Seiffert , S. Serrano , P. Simon , C. Sirignano , G. Sirri , A. Spurio Mancini , L. Stanco , J. -L. Starck , J. Steinwagner , P. Tallada-Crespí , A. N. Taylor , I. Tereno , S. Toft , R. Toledo-Moreo , F. Torradeflot , L. Valenziano , J. Valiviita , T. Vassallo , G. Verdoes Kleijn , A. Veropalumbo , Y. Wang , J. Weller , A. Zacchei , G. Zamorani , F. M. Zerbi , E. Zucca , V. Allevato , M. Bolzonella , E. Bozzo , C. Burigana , M. Calabrese , D. Di Ferdinando , J. A. Escartin Vigo , S. Matthew , N. Mauri , R. B. Metcalf , A. A. Nucita , M. Pöntinen , C. Porciani , V. Scottez , M. Tenti , M. Viel , M. Wiesmann , Y. Akrami , I. T. Andika , R. E. Angulo , S. Anselmi , M. Archidiacono , F. Atrio-Barandela , A. Balaguera-Antolinez , M. Bethermin , A. Blanchard , H. Böhringer , S. Borgani , M. L. Brown , S. Bruton , A. Calabro , B. Camacho Quevedo , A. Cappi , F. Caro , C. S. Carvalho , T. Castro , F. Cogato , S. Conseil , S. Contarini , A. R. Cooray , O. Cucciati , F. De Paolis , G. Desprez , A. Díaz-Sánchez , J. M. Diego , P. Dimauro , A. Enia , Y. Fang , P. G. Ferreira , A. Finoguenov , A. Franco , K. Ganga , J. García-Bellido , T. Gasparetto , V. Gautard , R. Gavazzi , E. Gaztanaga , F. Giacomini , F. Gianotti , G. Gozaliasl , M. Guidi , C. M. Gutierrez , A. Hall , S. Hemmati , C. Hernández-Monteagudo , H. Hildebrandt , J. Hjorth , J. J. E. Kajava , Y. Kang , V. Kansal , D. Karagiannis , K. Kiiveri , C. C. Kirkpatrick , S. Kruk , J. Le Graet , F. Lepori , G. Leroy , J. Lesgourgues , L. Leuzzi , T. I. Liaudat , S. J. Liu , A. Loureiro , J. Macias-Perez , G. Maggio , M. Magliocchetti , F. Mannucci , R. Maoli , J. Martín-Fleitas , C. J. A. P. Martins , L. Maurin , M. Migliaccio , M. Miluzio , P. Monaco , G. Morgante , C. Murray , S. Nadathur , K. Naidoo , A. Navarro-Alsina , S. Nesseris , F. Passalacqua , K. Paterson , L. Patrizii , A. Pisani , D. Potter , S. Quai , M. Radovich , P. Reimberg , I. Risso , P. -F. Rocci , S. Sacquegna , M. Sahlén , E. Sarpa , J. Schaye , A. Schneider , M. Sereno , A. Silvestri , L. C. Smith , J. Stadel , C. Tao , G. Testera , R. Teyssier , S. Tosi , A. Troja , M. Tucci , C. Valieri , A. Venhola , D. Vergani , F. Vernizzi , G. Verza , N. A. Walton

Software libraries are the elementary building blocks of open source software ecosystems, extending the capabilities of programming languages beyond their standard libraries. Although ecosystem health is often quantified using data on…

Software Engineering · Computer Science 2024-11-25 Gábor Mészáros , Johannes Wachs

The AFLOW Library of Crystallographic Prototypes has been updated to include an additional 683 entries, which now reaches 1,783 prototypes. We have also made some changes to the presentation of the entries, including a more consistent…

Being able to duplicate published research results is an important process of conducting research whether to build upon these findings or to compare with them. This process is called "replicability" when using the original authors'…

Digital Libraries · Computer Science 2020-05-07 Nicolas Bonneel , David Coeurjolly , Julie Digne , Nicolas Mellado

Over the past few years, Astrophysics has experienced an unprecedented increase in research output, as is evident from the year-over-year increase in the number of research papers put onto the arXiv. As a result, keeping up with progress…

Instrumentation and Methods for Astrophysics · Physics 2026-02-16 Rommulus Francis Lewis , Hetansh Shah , Amruth Alfred

The rapid growth in scale and complexity of both computational and observational astrophysics over the past decade necessitates efficient and intuitive methods for examining and visualizing large datasets. Here, I present {\it AstroBlend},…

Instrumentation and Methods for Astrophysics · Physics 2016-02-11 J. P. Naiman

As software has become an integral part of scientific workflows, reproducible research practices must take it into account. In what way? Archiving source code is a necessary but insufficient condition. The ability to redeploy software…

Software Engineering · Computer Science 2021-12-09 Ludovic Courtès

The automatic generation of source code is one of the long-lasting dreams in software engineering research. Several techniques have been proposed to speed up the writing of new code. For example, code completion techniques can recommend to…

Software Engineering · Computer Science 2023-02-09 Matteo Ciniselli , Luca Pascarella , Emad Aghajani , Simone Scalabrino , Rocco Oliveto , Gabriele Bavota