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Discovery gene-disease links is important in biology and medicine areas, enabling disease identification and drug repurposing. Machine learning approaches accelerate this process by leveraging biological knowledge represented in ontologies…

Machine Learning · Computer Science 2025-04-14 Catarina Canastra , Cátia Pesquita

Understanding the sequence of cognitive operations that underlie decision-making is a fundamental challenge in cognitive neuroscience. Traditional approaches often rely on group-level statistics, which obscure trial-by-trial variations in…

Neurons and Cognition · Quantitative Biology 2025-04-15 Rick den Otter , Gabriel Weindel , Sjoerd Stuit , Leendert van Maanen

Event relation detection is a fundamental NLP task, leveraged in many downstream applications, whose modeling requires datasets annotated with event relations of various types. However, systematic and complete annotation of these relations…

Computation and Language · Computer Science 2024-12-18 Alon Eirew , Eviatar Nachshoni , Aviv Slobodkin , Ido Dagan

We propose Object-oriented Neural Programming (OONP), a framework for semantically parsing documents in specific domains. Basically, OONP reads a document and parses it into a predesigned object-oriented data structure (referred to as…

Machine Learning · Computer Science 2018-07-26 Zhengdong Lu , Xianggen Liu , Haotian Cui , Yukun Yan , Daqi Zheng

Object-Centric Process Mining (OCPM) enables business process analysis from multiple perspectives. For example, an educational path can be examined from the viewpoints of students, teachers, and groups. This analysis depends on…

Databases · Computer Science 2025-04-22 Najmeh Miri , Shahrzad Khayatbashi , Jelena Zdravkovic , Amin Jalali

Whilst most engineered systems use signals that are continuous in time, there is a domain of systems in which signals consist of events. Events, like Dirac delta functions, have no meaningful time duration. Many important real-world systems…

Neural and Evolutionary Computing · Computer Science 2014-06-02 Jonathan Tapson , André van Schaik

Database query performance problem determination is often performed by analyzing query execution plans (QEPs) in addition to other performance data. As the query workloads that organizations run, have become larger and more complex,…

Databases · Computer Science 2015-10-13 Guilherme Damasio , Piotr Mierzejewski , Jaroslaw Szlichta , Calisto Zuzarte

Recognizing entities in texts is a central need in many information-seeking scenarios, and indeed, Named Entity Recognition (NER) is arguably one of the most successful examples of a widely adopted NLP task and corresponding NLP technology.…

Computation and Language · Computer Science 2023-10-24 Uri Katz , Matan Vetzler , Amir DN Cohen , Yoav Goldberg

Unsupervised feature extraction algorithms form one of the most important building blocks in machine learning systems. These algorithms are often adapted to the event-based domain to perform online learning in neuromorphic hardware.…

Neural and Evolutionary Computing · Computer Science 2019-07-31 Saeed Afshar , Ying Xu , Jonathan Tapson , André van Schaik , Gregory Cohen

The meaning of a word often varies depending on its usage in different domains. The standard word embedding models struggle to represent this variation, as they learn a single global representation for a word. We propose a method to learn…

Computation and Language · Computer Science 2019-10-22 Lahari Poddar , Gyorgy Szarvas , Lea Frermann

We propose an ensemble approach to predict the labels in linear programming word problems. The entity identification and the meaning representation are two types of tasks to be solved in the NL4Opt competition. We propose the ensembleCRF…

Computation and Language · Computer Science 2023-01-02 JiangLong He , Mamatha N , Shiv Vignesh , Deepak Kumar , Akshay Uppal

The purpose of this document is to help individuals use the "Essential Motor Cortex Signal Processing MATLAB Toolbox". The toolbox implements various methods for three major aspects of investigating human motor cortex from Neuroscience view…

Signal Processing · Electrical Eng. & Systems 2020-07-23 Esmaeil Seraj , Karthiga Mahalingam

With the success of deep learning, object recognition systems that can be deployed for real-world applications are becoming commonplace. However, inference that needs to largely take place on the `edge' (not processed on servers), is a…

Computer Vision and Pattern Recognition · Computer Science 2020-01-30 Andres Ussa , Luca Della Vedova , Vandana Reddy Padala , Deepak Singla , Jyotibdha Acharya , Charles Zhang Lei , Garrick Orchard , Arindam Basu , Bharath Ramesh

Workflow technology is widely used to facilitate the business process in enterprise information systems (EIS), and it has the potential to reduce design time, enhance product quality and decrease product cost. However, significant…

Software Engineering · Computer Science 2012-09-19 Tingyu Liu , Yalong Cheng , Zhonghua Ni

A novel approach for creating ER conceptual models and an algorithm for transforming them to the relational model has been developed by modifying and extending the existing methods. A part of the new algorithm has previously been presented.…

Databases · Computer Science 2013-07-18 Dhammika Pieris

Process mining provides methods to analyse event logs generated by information systems during the execution of processes. It thereby supports the design, validation, and execution of processes in domains ranging from healthcare, through…

Databases · Computer Science 2024-02-06 Mehdi Acheli , Daniela Grigori , Matthias Weidlich

This article reviews recent advances in applying natural language processing (NLP) to Electronic Health Records (EHRs) for computational phenotyping. NLP-based computational phenotyping has numerous applications including diagnosis…

Computation and Language · Computer Science 2018-06-18 Zexian Zeng , Yu Deng , Xiaoyu Li , Tristan Naumann , Yuan Luo

Research methods and procedures are core aspects of the research process. Metadata focused on these components is critical to supporting the FAIR principles, particularly reproducibility. The research reported on in this paper presents a…

Decision mining enables the discovery of decision rules from event logs or streams, and constitutes an important part of in-depth analysis and optimisation of business processes. So far, decision mining has been merely applied in an ex-post…

Artificial Intelligence · Computer Science 2023-03-08 Beate Scheibel , Stefanie Rinderle-Ma

The discipline of process mining aims to study processes in a data-driven manner by analyzing historical process executions, often employing Petri nets. Event data, extracted from information systems (e.g. SAP), serve as the starting point…

Artificial Intelligence · Computer Science 2022-04-11 Marco Pegoraro , Merih Seran Uysal , Wil M. P. van der Aalst