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In single-particle cryo-electron microscopy (cryo-EM), K-means clustering algorithm is widely used in unsupervised 2D classification of projection images of biological macromolecules. 3D ab initio reconstruction requires accurate…

Quantitative Methods · Quantitative Biology 2017-01-03 Yaofang Xu , Jiayi Wu , Chang-Cheng Yin , Youdong Mao

In general, the clustering problem is NP-hard, and global optimality cannot be established for non-trivial instances. For high-dimensional data, distance-based methods for clustering or classification face an additional difficulty, the…

Statistics Theory · Mathematics 2016-04-26 Tsvetan Asamov , Adi Ben-Israel

In this paper, we propose a regularized mixture probabilistic model to cluster matrix data and apply it to brain signals. The approach is able to capture the sparsity (low rank, small/zero values) of the original signals by introducing…

Methodology · Statistics 2018-08-07 Xu Gao , Weining Shen , Hernando Ombao

This paper gives a k-means approximation algorithm that is efficient in the relational algorithms model. This is an algorithm that operates directly on a relational database without performing a join to convert it to a matrix whose rows…

Data Structures and Algorithms · Computer Science 2021-05-24 Benjamin Moseley , Kirk Pruhs , Alireza Samadian , Yuyan Wang

Electron Microscopy (EM) image (or volume) segmentation has become significantly important in recent years as an instrument for connectomics. This paper proposes a novel agglomerative framework for EM segmentation. In particular, given an…

Computer Vision and Pattern Recognition · Computer Science 2015-06-09 Toufiq Parag , Anirban Chakraborty , Stephen Plaza , Lou Scheffer

As the popularity of hierarchical point forecast reconciliation methods increases, there is a growing interest in probabilistic forecast reconciliation. Many studies have utilized machine learning or deep learning techniques to implement…

Artificial Intelligence · Computer Science 2023-11-22 Guanyu Zhang , Feng Li , Yanfei Kang

Correlation clustering is a widely studied framework for clustering based on pairwise similarity and dissimilarity scores, but its best approximation algorithms rely on impractical linear programming relaxations. We present faster…

Data Structures and Algorithms · Computer Science 2022-06-27 Nate Veldt

Proximities are at the heart of almost all machine learning methods. If the input data are given as numerical vectors of equal lengths, euclidean distance, or a Hilbertian inner product is frequently used in modeling algorithms. In a more…

Machine Learning · Computer Science 2020-09-01 Maximilian Münch , Michiel Straat , Michael Biehl , Frank-Michael Schleif

Mixture models of Plackett-Luce (PL) -- one of the most fundamental ranking models -- are an active research area of both theoretical and practical significance. Most previously proposed parameter estimation algorithms instantiate the EM…

Machine Learning · Computer Science 2023-02-13 Duc Nguyen , Anderson Y. Zhang

We consider the classical $k$-means clustering problem in the setting bi-criteria approximation, in which an algoithm is allowed to output $\beta k > k$ clusters, and must produce a clustering with cost at most $\alpha$ times the to the…

Data Structures and Algorithms · Computer Science 2015-08-04 Konstantin Makarychev , Yury Makarychev , Maxim Sviridenko , Justin Ward

We introduce a proximal version of dual coordinate ascent method. We demonstrate how the derived algorithmic framework can be used for numerous regularized loss minimization problems, including $\ell_1$ regularization and structured output…

Machine Learning · Statistics 2012-11-13 Shai Shalev-Shwartz , Tong Zhang

Given a finite metric space $(X\cup Y, \mathbf{d})$ the $k$-median problem is to find a set of $k$ centers $C\subseteq Y$ that minimizes $\sum_{p\in X} \min_{c\in C} \mathbf{d}(p,c)$. In general metrics, the best polynomial time algorithm…

Data Structures and Algorithms · Computer Science 2026-03-26 Anne Driemel , Jan Höckendorff , Ioannis Psarros , Christian Sohler , Di Yue

The conventional clustering algorithms mine static databases and generate a set of patterns in the form of clusters. Many real life databases keep growing incrementally. For such dynamic databases, the patterns extracted from the original…

Databases · Computer Science 2013-10-28 A. M. Sowjanya , M. Shashi

We recently proposed a general algorithm for approximating nonstandard Bayesian posterior distributions by minimization of their Kullback-Leibler divergence with respect to a more convenient approximating distribution. In this note we offer…

Computation · Statistics 2014-01-10 Tim Salimans

This survey describes probabilistic algorithms for linear algebra computations, such as factorizing matrices and solving linear systems. It focuses on techniques that have a proven track record for real-world problem instances. The paper…

Numerical Analysis · Mathematics 2021-03-17 Per-Gunnar Martinsson , Joel Tropp

This paper introduces a regularized projection matrix approximation framework designed to recover cluster information from the affinity matrix. The model is formulated as a projection approximation problem, incorporating an entry-wise…

Machine Learning · Computer Science 2024-11-08 Zheng Zhai , Jialu Xu , Mingxin Wu , Xiaohui Li

The proximal bundle method (PBM) is a fundamental and computationally effective algorithm for solving nonsmooth optimization problems. In this paper, we present the first variant of the PBM for smooth objectives, achieving an accelerated…

Optimization and Control · Mathematics 2025-04-30 David Fersztand , Xu Andy Sun

Recent Reinforcement Learning (RL) algorithms making use of Kullback-Leibler (KL) regularization as a core component have shown outstanding performance. Yet, only little is understood theoretically about why KL regularization helps, so far.…

Machine Learning · Computer Science 2021-01-07 Nino Vieillard , Tadashi Kozuno , Bruno Scherrer , Olivier Pietquin , Rémi Munos , Matthieu Geist

We study data clustering problems with $\ell_p$-norm objectives (e.g. $k$-Median and $k$-Means) in the context of individual fairness. The dataset consists of $n$ points, and we want to find $k$ centers such that (a) the objective is…

Data Structures and Algorithms · Computer Science 2021-06-24 Deeparnab Chakrabarty , Maryam Negahbani

In this paper, we propose a new and simple approach to the approximation algorithms that are modified and improved from our published results. The computational and graphical examples are presented with the aid of Maple procedures.

Numerical Analysis · Mathematics 2025-06-24 Quan Le Phuong