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Diffusion models have established themselves as state-of-the-art generative models across various data modalities, including images and videos, due to their ability to accurately approximate complex data distributions. Unlike traditional…

Machine Learning · Computer Science 2025-10-23 Daniel Wesego

We develop VSD, a method for conditioning a generative model of discrete, combinatorial designs on a rare desired class by efficiently evaluating a black-box (e.g. experiment, simulation) in a batch sequential manner. We call this task…

Machine Learning · Statistics 2025-11-24 Daniel M. Steinberg , Rafael Oliveira , Cheng Soon Ong , Edwin V. Bonilla

Boolean networks are special types of finite state time-discrete dynamical systems. A Boolean network can be described by a function from an n-dimensional vector space over the field of two elements to itself. A fundamental problem in…

Quantitative Methods · Quantitative Biology 2013-07-03 Yi Ming Zou

Surrogate testing techniques have been used widely to investigate the presence of dynamical nonlinearities, an essential ingredient of deterministic chaotic processes. Traditional surrogate testing subscribes to statistical hypothesis…

Signal Processing · Electrical Eng. & Systems 2019-07-18 Radhakrishnan Nagarajan

High dimensional time series are endemic in applications of machine learning such as robotics (sensor data), computational biology (gene expression data), vision (video sequences) and graphics (motion capture data). Practical nonlinear…

Machine Learning · Statistics 2011-07-26 Andreas C. Damianou , Michalis K. Titsias , Neil D. Lawrence

Neuro-Fuzzy Modeling has been applied in a wide variety of fields such as Decision Making, Engineering and Management Sciences etc. In particular, applications of this Modeling technique in Decision Making by involving complex Systems of…

Artificial Intelligence · Computer Science 2013-04-29 Arindam Chaudhuri , Kajal De , Dipak Chatterjee

The field of statistical relational learning aims at unifying logic and probability to reason and learn from data. Perhaps the most successful paradigm in the field is probabilistic logic programming: the enabling of stochastic primitives…

Machine Learning · Computer Science 2018-09-20 Stefanie Speichert , Vaishak Belle

Neural population activity exhibits complex, nonlinear dynamics, varying in time, over trials, and across experimental conditions. Here, we develop Conditionally Linear Dynamical System (CLDS) models as a general-purpose method to…

Neurons and Cognition · Quantitative Biology 2025-10-31 Victor Geadah , Amin Nejatbakhsh , David Lipshutz , Jonathan W. Pillow , Alex H. Williams

Encoding a sequence of observations is an essential task with many applications. The encoding can become highly efficient when the observations are generated by a dynamical system. A dynamical system imposes regularities on the observations…

Machine Learning · Statistics 2018-05-29 Arash Mehrjou , Friedrich Solowjow , Sebastian Trimpe , Bernhard Schölkopf

Conditional density estimation (CDE) is the task of estimating the probability of an event conditioned on some inputs. A neural network (NN) can also be used to compute the output distribution for continuous-domain, which can be viewed as…

Machine Learning · Computer Science 2021-12-30 Bing Chen , Mazharul Islam , Jisuo Gao , Lin Wang

In this paper we introduce a fuzzy constraint linear discriminant analysis (FC-LDA). The FC-LDA tries to minimize misclassification error based on modified perceptron criterion that benefits handling the uncertainty near the decision…

Artificial Intelligence · Computer Science 2017-01-02 Hamid Reza Hassanzadeh , Hadi Sadoghi Yazdi , Abedin Vahedian

A variety of complex biological, natural and man-made systems exhibit non-Markovian dynamics that can be modeled through fractional order differential equations, yet, we lack sample comlexity aware system identification strategies. Towards…

Systems and Control · Electrical Eng. & Systems 2025-06-23 Xiaole Zhang , Vijay Gupta , Paul Bogdan

Boolean networks are a popular modeling framework in computational biology to capture the dynamics of molecular networks, such as gene regulatory networks. It has been observed that many published models of such networks are defined by…

Molecular Networks · Quantitative Biology 2019-12-06 Elijah Paul , Gleb Pogudin , William Qin , Reinhard Laubenbacher

The dynamic cavity method provides the most efficient way to evaluate probabilities of dynamic trajectories in systems of stochastic units with unidirectional sparse interactions. It is closely related to sum-product algorithms widely used…

Disordered Systems and Neural Networks · Physics 2021-11-10 Giuseppe Torrisi , Alessia Annibale , Reimer Kühn

The time taken for gene expression varies not least because proteins vary in length considerably. This paper uses an abstract, tuneable Boolean regulatory network model to explore gene expression time variation. In particular, it is shown…

Biomolecules · Quantitative Biology 2016-03-16 Larry Bull

Fuzzy rule based systems (FRBSs) is a rule-based system which uses linguistic fuzzy variables as antecedents and consequent to represent human understandable knowledge. They have been applied to various applications and areas throughout the…

Artificial Intelligence · Computer Science 2023-05-30 Ayush K. Varshney , Vicenç Torra

Machine learning recently proved efficient in learning differential equations and dynamical systems from data. However, the data is commonly assumed to originate from a single never-changing system. In contrast, when modeling real-world…

Machine Learning · Computer Science 2022-06-28 Leonard Bereska , Efstratios Gavves

An important constraint of Fuzzy Inference Systems (FIS) is their structured rules defined based on evaluating all input variables. Indeed, the length of all fuzzy rules and the number of input variables are equal. However, in many…

Artificial Intelligence · Computer Science 2024-02-26 Armin Salimi-Badr

The gene networks that comprise the circadian clock modulate biological function across a range of scales, from gene expression to performance and adaptive behaviour. The clock functions by generating endogenous rhythms that can be…

Molecular Networks · Quantitative Biology 2012-10-25 Ozgur Akman , Steven Watterson , Andrew Parton , Nigel Binns , Andrew Millar , Peter Ghazal

The Fourier representation for the uniform distribution over the Boolean cube has found numerous applications in algorithms and complexity analysis. Notably, in learning theory, learnability of Disjunctive Normal Form (DNF) under uniform as…

Data Structures and Algorithms · Computer Science 2025-06-03 Mohsen Heidari , Roni Khardon