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In an industrial context, the activity of sensors is recorded at a high frequency. A challenge is to automatically detect abnormal measurement behavior. Considering the sensor measures as functional data, the problem can be formulated as…

Statistics Theory · Mathematics 2022-03-09 Martial Amovin-Assagba , Irène Gannaz , Julien Jacques

Responding to disease outbreaks requires close surveillance of their trajectories, but outbreak detection is hindered by the high noise in epidemic time series. Aggregating information across data sources has shown great denoising ability…

Machine Learning · Computer Science 2025-11-11 Ruiqi Lyu , Alistair Turcan , Bryan Wilder

Early Warning Signals (EWSs) are vital for implementing preventive measures before a disease turns into a pandemic. While new diseases exhibit unique behaviors, they often share fundamental characteristics from a dynamical systems…

Machine Learning · Computer Science 2025-01-15 Reza Miry , Amit K. Chakraborty , Russell Greiner , Mark A. Lewis , Hao Wang , Tianyu Guan , Pouria Ramazi

Methods to detect the emergence of infectious diseases, and approach to the "critical transition" RE = 1, have to potential to avert substantial disease burden by facilitating preemptive actions like vaccination campaigns. Early warning…

Other Quantitative Biology · Quantitative Biology 2025-04-16 Callum R. K. Arnold , Matthew J. Ferrari

Outlier detection algorithms typically assign an outlier score to each observation in a dataset, indicating the degree to which an observation is an outlier. However, these scores are often not comparable across algorithms and can be…

Machine Learning · Computer Science 2024-10-31 Philipp Röchner , Henrique O. Marques , Ricardo J. G. B. Campello , Arthur Zimek , Franz Rothlauf

In this paper, we develop a method to estimate the infection-rate of a disease, over a region, as a field that varies in space and time. To do so, we use time-series of case-counts of symptomatic patients as observed in the areal units that…

Applications · Statistics 2024-06-19 Cosmin Safta , Wyatt Bridgman , Jaideep Ray

This study presents a method to discover an outbreak of an infectious disease in a region for which data are missing, but which is at work as a disease spreader. Node discovery for the spread of an infectious disease is defined as…

Artificial Intelligence · Computer Science 2011-10-18 Yoshiharu Maeno

The Secondary Attack Rate (SAR) is a measure of how infectious a communicable disease is, and is often estimated based on studies of disease transmission in households. The Chain Binomial model is a simple model for disease outbreaks, and…

In data analysis, contamination caused by outliers is inevitable, and robust statistical methods are strongly demanded. In this paper, our concern is to develop a new approach for robust data analysis based on scoring rules. The scoring…

Statistics Theory · Mathematics 2013-11-22 Takafumi Kanamori , Hironori Fujisawa

Infectious disease modeling and forecasting have played a key role in helping assess and respond to epidemics and pandemics. Recent work has leveraged data on disease peak infection and peak hospital incidence to fit compartmental models…

The problem of quickest detection of a change in distribution is considered under the assumption that the pre-change distribution is known, and the post-change distribution is only known to belong to a family of distributions…

Applications · Statistics 2019-01-30 Tze Siong Lau , Wee Peng Tay , Venugopal V. Veeravalli

Prediction of the progression of an infectious disease outbreak is important for planning and coordinating a response. Differential equations are often used to model an epidemic outbreak's behaviour but are challenging to parameterise.…

Populations and Evolution · Quantitative Biology 2022-03-16 David Wu , Helen Petousis-Harris , Janine Paynter , Vinod Suresh , Oliver J. Maclaren

In this paper we introduce a new method for detecting outliers in a set of proportions. It is based on the construction of a suitable two-way contingency table and on the application of an algorithm for the detection of outlying cells in…

Methodology · Statistics 2016-08-04 Flavio Mignone , Fabio Rapallo

Insect outbreaks are biotic disturbances in forests and agroecosystems that cause economic and ecological damage. This phenomenon depends on a variety of biological and physical factors. The complexity and practical importance of the issue…

Quantitative Methods · Quantitative Biology 2022-09-07 Gabriel R. Palma , Wesley A. C. Godoy , Eduardo Engel , Douglas Lau , Edgar Galvan , Oliver Mason , Charles Markham , Rafael A. Moral

Understanding age-group dynamics of infectious diseases is a fundamental issue for both scientific study and policymaking. Age-structure epidemic models were developed in order to study and improve our understanding of these dynamics. By…

Populations and Evolution · Quantitative Biology 2019-11-22 Rami Yaari , Amit Huppert , Itai Dattner

In this paper, we explore whether the infection-rate of a disease can serve as a robust monitoring variable in epidemiological surveillance algorithms. The infection-rate is dependent on population mixing patterns that do not vary…

Applications · Statistics 2024-07-17 Wyatt Bridgman , Cosmin Safta , Jaideep Ray

Mixtures of multivariate contaminated shifted asymmetric Laplace distributions are developed for handling asymmetric clusters in the presence of outliers (also referred to as bad points herein). In addition to the parameters of the related…

Methodology · Statistics 2018-04-25 Katherine Morris , Antonio Punzo , Paul D. McNicholas , Ryan P. Browne

In this work, we review the figures used to characterize an epidemic outbreak most. Particular attention is drawn to epidemic spreading at time-varying transition rates. A time-varying SIR-like model is used to describe the epidemic…

Populations and Evolution · Quantitative Biology 2020-11-06 Hernán De Battista , José García-Clúa , Sebastián Nuñez , Fernando Inthamoussou , Fabricio Garelli

Infectious diseases, either emerging or long-lasting, place numerous people at risk and bring heavy public health burdens worldwide. In the process against infectious diseases, predicting the epidemic risk by modeling the disease…

Machine Learning · Computer Science 2023-08-08 Mutong Liu , Yang Liu , Jiming Liu

Compartmental models are the most widely used framework for modeling infectious diseases. These models have been continuously refined to incorporate all the realistic mechanisms that can shape the course of an epidemic outbreak. Building on…