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A major goal of modern computational biology is to simulate the collective behaviour of large cell populations starting from the intricate web of molecular interactions occurring at the microscopic level. In this paper we describe a…

Biological Physics · Physics 2007-05-23 Roberto Chignola , Edoardo Milotti

We study nonequilibrium phase transitions of reaction-diffusion systems defined on randomly diluted lattices, focusing on the transition across the lattice percolation threshold. To develop a theory for this transition, we combine classical…

Statistical Mechanics · Physics 2009-04-27 Man Young Lee , Thomas Vojta

It is well known that in a quantum phase transition (QPT), entanglement remains short ranged [Osterloh et al., Nature 416 608-610 (2005)]. We ask if there is a quantum property entailing the whole system which diverges near this point.…

Quantum Physics · Physics 2016-05-18 Tahereh Abad , Vahid Karimipour

The fission process is a fascinating phenomenon in which the atomic nucleus, a compact self-bound mesoscopic system, undergoes a spontaneous or induced quantum transition into two or more fragments. A predictive, accurate and precise…

Nuclear Theory · Physics 2019-10-10 J. Dobaczewski

The motion of interfaces is an essential feature of microstructure evolution in crystalline materials. While atomic-scale descriptions provide mechanistic clarity, continuum descriptions are important for understanding microstructural…

Materials Science · Physics 2022-02-14 Marco Salvalaglio , David J. Srolovitz , Jian Han

Stochastic thermodynamics provides a useful set of tools to analyze and constrain the behavior of far from equilibrium systems. In this paper, we report an application of ideas from stochastic thermodynamics to the problem of membrane…

Soft Condensed Matter · Physics 2019-10-25 Michael Nguyen , Suriyanarayanan Vaikuntanathan

A class of nucleon-nucleon interactions which are exactly phase equivalent to a given realistic nucleon-nucleon interaction are exhibited. These interaction have the property that the RMS radius of the deuteron can be made arbitrarily large…

Nuclear Theory · Physics 2008-11-26 Wayne N. Polyzou

The quantitative description of the effects of nuclear dynamics on the measured neutrino-nucleus cross sections -- needed to reduce the systematic uncertainty of long baseline neutrino oscillation experiments -- involves severe…

Nuclear Theory · Physics 2015-08-19 Omar Benhar , Noemi Rocco

Dislocation nucleation in homogeneous crystals initially unfolds as a linear symmetry-breaking elastic instability. In the absence of explicit nucleation centers, such instability develops simultaneously all over the crystal and due to the…

Materials Science · Physics 2023-02-24 R. Baggio , O. U. Salman , L. Truskinovsky

Recently it has been demonstrated that the connectivity transition from microscopic connectivity to macroscopic connectedness, known as percolation, is generically announced by a cascade of microtransitions of the percolation order…

Disordered Systems and Neural Networks · Physics 2016-01-25 Malte Schröder , Wei Chen , Jan Nagler

Nanomechanics has brought mesoscopic physics into the world of vibrations. Because nanomechanical systems are small, fluctuations are significant, the vibrations become nonlinear already for comparatively small amplitudes, and new…

Mesoscale and Nanoscale Physics · Physics 2022-12-12 Adrian Bachtold , Joel Moser , M. I. Dykman

A neutrino produced in a particle decay maintains an unusual wave nature that reveals a diffraction phenomenon in a large spatial region. Diffraction gives a new component to a neutrino flux in this region and modifies determinations of…

High Energy Physics - Phenomenology · Physics 2012-01-17 Kenzo Ishikawa , Yutaka Tobita

Randomly crosslinked macromolecules undergo a liquid-to-amorphous solid phase transition at a critical crosslink concentration. This transition has two main signatures: the random localization of a fraction of the monomers and the emergence…

Disordered Systems and Neural Networks · Physics 2009-10-31 Horacio E. Castillo , Paul M. Goldbart

The dynamical mechanism of multinucleon transfer (MNT) reactions has been investigated within the dinuclear system (DNS) model, in which the sequential nucleon transfer is described by solving a set of microscopically derived master…

Nuclear Theory · Physics 2020-03-05 Peng-Hui Chen , Fei Niu , Wei Zuo , Zhao-Qing Feng

Colloidal systems offer the ideal conditions to study the nucleation process, both from an experimental viewpoint, due to their relative large size and long time-scales, and from a modeling point of view, due to the tunability of their…

Soft Condensed Matter · Physics 2016-11-23 John Russo , Hajime Tanaka

Geometrical arguments suggest that pore-mediated nucleation happens in general in a two-step fashion, the first step being nucleation within the pore, the second being nucleation from the filled pore into solution [Page & Sear, Phys. Rev.…

Soft Condensed Matter · Physics 2013-10-14 Lester O. Hedges , Stephen Whitelam

Phase transitions in equilibrium and nonequilibrium systems play a major role in the natural sciences. In dynamical networks, phase transitions organize qualitative changes in the collective behavior of coupled dynamical units. Adaptive…

Adaptation and Self-Organizing Systems · Physics 2023-02-22 Jan Fialkowski , Serhiy Yanchuk , Igor M. Sokolov , Eckehard Schöll , Georg A. Gottwald , Rico Berner

Electrostatic forces play many important roles in molecular biology, but are hard to model due to the complicated interactions between biomolecules and the surrounding solvent, a fluid composed of water and dissolved ions. Continuum model…

Numerical Analysis · Mathematics 2015-12-29 Jaydeep P. Bardhan , Matthew G. Knepley

We show through rigorous calculations that dielectric microspheres can be organized by an incident electromagnetic plane wave into stable cluster configurations, which we call photonic molecules. The long-range optical binding force arises…

Mesoscale and Nanoscale Physics · Physics 2009-11-11 Jack Ng , Zhifang Lin , C. T. Chan , Ping Sheng

The problem of the structure of nucleons and their interaction in the concept of nonperturbative QCD is discussed as an approach to studying the transformation of current quarks into constituent ones and the search for the mechanism of such…

High Energy Physics - Phenomenology · Physics 2023-03-22 Vladimir I. Komarov