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While ubiquitous, energy redistribution remains a poorly understood facet of the nonequilibrium thermodynamics of biomolecules. At the molecular level, finite-size effects, pronounced nonlinearities, and ballistic processes produce behavior…

Biological Physics · Physics 2019-11-15 Justin E. Elenewski , Kirill A. Velizhanin , Michael Zwolak

In this paper we have investigated, through computer simulations, dislocation nucleation and dislocation dynamics in a heterostructure system with the lattice-mismatch interface, i.e. a system with internal strain. In particular, we have…

Materials Science · Physics 2018-04-20 Marco Patriarca , Antti Kuronen , Kimmo Kaski

Percolation refers to the emergence of a giant connected cluster in a disordered system when the number of connections between nodes exceeds a critical value. The percolation phase transitions were believed to be continuous until recently…

Disordered Systems and Neural Networks · Physics 2015-02-13 R. A. da Costa , S. N. Dorogovtsev , A. V. Goltsev , J. F. F. Mendes

First order phase transitions proceed via nucleation. The rate of nucleation varies exponentially with the free-energy barrier to nucleation, and so is highly sensitive to variations in this barrier. In practice, very few systems are…

Statistical Mechanics · Physics 2009-11-10 Richard P. Sear

Nucleation of a new phase almost always starts at a surface. This surface is almost always assumed not to change with time. However, surfaces can roughen, partially dissolve and change chemically with time. Each of these irreversible…

Soft Condensed Matter · Physics 2015-03-25 Richard P. Sear

A phase transformation in a metastable phase can be affected when it is subjected to a high intensity ultrasound wave. In this study we determined the effect of oscillation in pressure and temperature on a phase transformation using the…

Statistical Mechanics · Physics 2016-08-17 S. R. Haqshenas , I. J. Ford , N. Saffari

A rigorous mathematical framework for analyzing the chemical master equation (CME) with bistability, based on the theory of large deviation, is proposed. Using a simple phosphorylation-dephosphorylation cycle with feedback as an example, we…

Biological Physics · Physics 2009-05-26 Hao Ge , Hong Qian

Heterogeneous nucleation on catalytic surfaces plunged into a fluid is described through a stochastic model. To generate this non-equilibrium process we assume that the turn on of a electrostatic potential triggers a complex dynamics that…

Chemical Physics · Physics 2007-05-23 P. C. T. Dajello , I. Mozolevski , Z. G. S. Kipervaser

The dynamics of phase transitions plays a crucial r\^ole in the so-called interface between high energy particle physics and cosmology. Many of the interesting results generated during the last fifteen years or so rely on simplified…

High Energy Physics - Phenomenology · Physics 2007-05-23 Marcelo Gleiser

We introduce a mesocopic modeling approach for active systems. The continuum model allows to consider microscopic details as well as emerging macroscopic behavior and can be considered as a minimal continuum model to describe generic…

Soft Condensed Matter · Physics 2016-08-24 Francesco Alaimo , Simon Praetorius , Axel Voigt

The kinetics of dislocation reactions, such as dislocation multiplication, controls the plastic deformation in crystals beyond their elastic limit, therefore critical mechanisms in a number of applications in materials science. We present a…

Materials Science · Physics 2024-12-31 Soumendu Bagchi , Danny Perez

In active matter, the lack of momentum conservation makes non-reciprocal interactions the rule rather than the exception. They lead to a rich set of emerging behaviors that are hard to account for and to predict starting from the…

Statistical Mechanics · Physics 2024-02-06 Alberto Dinelli , Jérémy O'Byrne , Agnese Curatolo , Yongfeng Zhao , Peter Sollich , Julien Tailleur

We investigate the connections between microscopic chaos, defined on a dynamical level and arising from collisions between molecules, and diffusion, characterized by a mean square displacement proportional to the time. We use a number of…

Chaotic Dynamics · Physics 2007-05-23 C. P. Dettmann , E. G. D. Cohen

Astrophysical nucleosynthesis is a family of diverse processes by which atomic nuclei undergo nuclear reactions and decays to form new nuclei. The complex nature of nucleosynthesis, which can involve as many as tens of thousands of…

Nuclear Theory · Physics 2021-07-21 T. M. Sprouse , M. R. Mumpower , R. Surman

In most natural sciences there is currently the insight that it is necessary to bridge gaps between different processes which can be observed on different scales. This is especially true in the field of chemical reactions where the…

Molecular Networks · Quantitative Biology 2008-03-03 L. Sbano , M. Kirkilionis

Characterizing ion adsorption and diffusion in porous carbons is essential to understand the performance of such materials in a range of key technologies such as energy storage and capacitive deionisation. Nuclear Magnetic Resonance (NMR)…

Materials Science · Physics 2023-05-08 Anagha Sasikumar , Céline Merlet

In this paper, we use the cell dynamics method to study the dynamics of phase transformation when three phases exist. The system we study is a two-dimensional system. The system is able to achieve three phases coexistence, which for…

Materials Science · Physics 2009-11-11 M. Iwamatsu

Nucleation at large metastability is still largely an unsolved problem, although is a problem of tremendous current interest, with wide practical value. It is well-accepted that the classical nucleation theory (CNT) fails to provide a…

Statistical Mechanics · Physics 2010-12-22 Mantu Santra , Rakesh S. Singh , Biman Bagchi

In recent years impressive progress has been made in the development of highly accurate energy density functionals, which allow to treat medium-heavy nuclei. In this approach one tries to describe not only the ground state but also the…

Nuclear Theory · Physics 2014-11-21 M Baldo , LM Robledo , P. Schuck , X. Viñas

Recent experimental results on the static or quasistatic response of granular materials have been interpreted to suggest the inapplicability of the traditional engineering approaches, which are based on elasto-plastic models (which are…

Soft Condensed Matter · Physics 2007-05-23 Chay Goldenberg , Isaac Goldhirsch
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