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Temporal Networks, and more specifically, Markovian Temporal Networks, present a unique challenge regarding the community discovery task. The inherent dynamism of these systems requires an intricate understanding of memory effects and…

Physics and Society · Physics 2026-04-20 Giulio Virginio Clemente , Diego Garlaschelli

Many real world systems or web services can be represented as a network such as social networks and transportation networks. In the past decade, many algorithms have been developed to detect the communities in a network using connections…

Social and Information Networks · Computer Science 2015-01-21 Zhi Liu , Yan Huang

Genetic regulatory networks (GRNs) have been widely studied, yet there is a lack of understanding with regards to the final size and properties of these networks, mainly due to no network currently being complete. In this study, we analyzed…

Molecular Networks · Quantitative Biology 2019-03-13 Adrian I. Campos-González , Julio A. Freyre-González

Community detection is key to understand the structure of complex networks. However, the lack of appropriate evaluation strategies for this specific task may produce biased and incorrect results that might invalidate further analyses or…

Social and Information Networks · Computer Science 2019-09-24 Jeancarlo Campos Leão , Alberto H. F. Laender , Pedro O. S. Vaz de Melo

Community detection is a commonly used technique for identifying groups in a network based on similarities in connectivity patterns. To facilitate community detection in large networks, we recast the network to be partitioned into a smaller…

Social and Information Networks · Computer Science 2017-06-14 Natalie Stanley , Roland Kwitt , Marc Niethammer , Peter J. Mucha

Gene regulatory networks can be successfully modeled as Boolean networks. A much discussed hypothesis says that such model networks reproduce empirical findings the best if they are tuned to operate at criticality, i.e. at the borderline…

Molecular Networks · Quantitative Biology 2016-10-12 Pablo Villegas , José Ruiz-Franco , Jorge Hidalgo , Miguel A. Muñoz

Community structure detection in complex networks is important since it can help better understand the network topology and how the network works. However, there is still not a clear and widely-accepted definition of community structure,…

Social and Information Networks · Computer Science 2013-05-14 Zhong-Yuan Zhang , Kai-Di Sun , Si-Qi Wang

To find interesting structure in networks, community detection algorithms have to take into account not only the network topology, but also dynamics of interactions between nodes. We investigate this claim using the paradigm of…

Social and Information Networks · Computer Science 2012-03-19 Rumi Ghosh , Kristina Lerman

Community detection is the task of discovering groups of nodes sharing similar patterns within a network. With recent advancements in deep learning, methods utilizing graph representation learning and deep clustering have shown great…

Social and Information Networks · Computer Science 2022-11-14 E. Dmitriev , M. W. Chekol , S. Wang

Detecting communities has long been popular in the research on networks. It is usually modeled as an unsupervised clustering problem on graphs, based on heuristic assumptions about community characteristics, such as edge density and node…

Social and Information Networks · Computer Science 2018-04-24 Carl Yang , Hanqing Lu , Kevin Chen-Chuan Chang

Nowadays, there are many approaches designed for the task of detecting communities in social networks. Among them, some methods only consider the topological graph structure, while others take use of both the graph structure and the node…

Artificial Intelligence · Computer Science 2017-09-06 Salma Ben Dhaou , Kuang Zhou , Mouloud Kharoune , Arnaud Martin , Boutheina Ben Yaghlane

To better understand DNA's 3D folding in cell nuclei, researchers developed chromosome capture methods such as Hi-C that measure the contact frequencies between all DNA segment pairs across the genome. As Hi-C data sets often are massive,…

Biological Physics · Physics 2023-11-14 Anton Holmgren , Dolores Bernenko , Ludvig Lizana

Searching for local communities is an important research problem that supports advanced data analysis in various complex networks, such as social networks, collaboration networks, cellular networks, etc. The evolution of such networks over…

Social and Information Networks · Computer Science 2022-10-19 Yifu Tang , Jianxin Li , Nur Al Hasan Haldar , Ziyu Guan , Jiajie Xu , Chengfei Liu

In the past decade, synchronization on complex networks has attracted increasing attentions from various research disciplines. Most previous works, however, focus only on the dynamic behaviors of synchronization process in the stable…

Data Analysis, Statistics and Probability · Physics 2011-10-26 Zhao Zhuo , Shimin Cai , Jie Zhang , Zhongqian Fu

The rise in complexity of network data in neuroscience, social networks, and protein-protein interaction networks has been accompanied by several efforts to model and understand these data at different scales. A key multiscale network…

Methodology · Statistics 2025-03-04 Al-Fahad Al-Qadhi , Keith Levin , Vincent Lyzinski

Time-stamped data are increasingly available for many social, economic, and information systems that can be represented as networks growing with time. The World Wide Web, social contact networks, and citation networks of scientific papers…

Physics and Society · Physics 2019-10-01 Matus Medo , An Zeng , Yi-Cheng Zhang , Manuel S. Mariani

Most community detection algorithms from the literature work as optimization tools that minimize a given \textit{fitness function}, while assuming that each node belongs to a single community. Since there is no hard concept of what a…

Neural and Evolutionary Computing · Computer Science 2014-06-11 Fabricio Olivetti de Franca , Guilherme Palermo Coelho

Detecting communities in large-scale networks is a challenging task when each vertex may belong to multiple communities, as is often the case in social networks. The multiple memberships of vertices and thus the strong overlaps among…

Social and Information Networks · Computer Science 2019-06-04 Elvis H. W. Xu , P. M. Hui

Hidden community is a new graph-theoretical concept recently proposed [4], in which the authors also propose a meta-approach called HICODE (Hidden Community Detection) for detecting hidden communities. HICODE is demonstrated through…

Social and Information Networks · Computer Science 2020-03-16 Jialu Bao , Kun He , Xiaodong Xin , Bart Selman , John E. Hopcroft

It is common in the study of networks to investigate meso-scale features to try to gain an understanding of network structure and function. For example, numerous algorithms have been developed to try to identify "communities," which are…

Social and Information Networks · Computer Science 2015-06-19 Lucas G. S. Jeub , Prakash Balachandran , Mason A. Porter , Peter J. Mucha , Michael W. Mahoney