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Standard Random Boolean Networks display an order-disorder phase transition. We add to the standard Random Boolean Networks a disconnection rule which couples the control and order parameters. By this way, the system is driven to the…

Disordered Systems and Neural Networks · Physics 2009-11-07 Bartolo Luque , Fernando J. Ballesteros , Enrique M. Muro

One way to model telecommunication networks are static Boolean models. However, dynamics such as node mobility have a significant impact on the performance evaluation of such networks. Consider a Boolean model in $\mathbb{R}^d$ and a random…

Probability · Mathematics 2021-12-24 Nils Aschenbruck , Stephan Bussmann , Hanna Döring

The generating functional method is employed to investigate the synchronous dynamics of Boolean networks, providing an exact result for the system dynamics via a set of macroscopic order parameters. The topology of the networks studied and…

Disordered Systems and Neural Networks · Physics 2015-05-28 Alexander Mozeika , David Saad

Previous work in Boolean dynamical networks has suggested that the number of components that must be controlled to select an existing attractor is typically set by the number of attractors admitted by the dynamics, with no dependence on the…

Molecular Networks · Quantitative Biology 2024-10-11 Bryan C. Daniels , Enrico Borriello

Percolation theory allows simple description of the phase transition based on the scaling properties of the network clusters with respect to a single parameter - site or bond occupation probability. How to design a network exhibiting the…

Quantum Physics · Physics 2020-03-19 Michael Siomau

Boolean Networks have been used to study numerous phenomena, including gene regulation, neural networks, social interactions, and biological evolution. Here, we propose a general method for determining the critical behavior of Boolean…

Disordered Systems and Neural Networks · Physics 2009-11-11 Andre A. Moreira , Luis A. N. Amaral

In this work, several random Boolean networks (RBN) are generated and analyzed from two characteristics: their time evolution diagram and their transition diagram. For this purpose, its randomness is estimated using three measures, of which…

Information Theory · Computer Science 2024-09-04 Manuel de J. Luevano , Alejandro Puga

Coregulation of the expression of groups of genes has been extensively demonstrated empirically in bacterial and eukaryotic systems. Such coregulation can arise through the use of shared regulatory motifs, which allow the coordinated…

Machine Learning · Statistics 2016-04-12 Jonathan H. Warrell , Musa M. Mhlanga

The study of random graphs has become very popular for real-life network modeling such as social networks or financial networks. Inhomogeneous long-range percolation (or scale-free percolation) on the lattice $\mathbb Z^d$, $d\ge1$, is a…

Probability · Mathematics 2014-09-29 Philippe Deprez , Rajat Subhra Hazra , Mario V. Wüthrich

Diverse biological networks exhibit universal features distinguished from those of random networks, calling much attention to their origins and implications. Here we propose a minimal evolution model of Boolean regulatory networks, which…

Molecular Networks · Quantitative Biology 2014-11-26 Deok-Sun Lee

When is it safe to approximate a complicated random Boolean network (RBN) as a simplified, easier to model RBN? When can static measures of network structure be reliably used to infer the network's dynamics? This simple experiment tests the…

Adaptation and Self-Organizing Systems · Physics 2010-05-20 Shaun Deaton , Seth Frey

Boolean networks may be viewed as idealizations of biological genetic networks, where each node is represented by an on-off switch which is a function of the binary output from some other nodes. We evolve connectivity in a single Boolean…

Biological Physics · Physics 2016-09-08 Stefan Bornholdt , Kim Sneppen

In many real network systems, nodes usually cooperate with each other and form groups, in order to enhance their robustness to risks. This motivates us to study a new type of percolation, group percolation, in interdependent networks under…

Physics and Society · Physics 2018-03-21 Zexun Wang , Dong Zhou , Yanqing Hu

The dynamics of Boolean networks (the N-K model) with scale-free topology are studied here. The existence of a phase transition governed by the value of the scale-free exponent of the network is shown analytically by analyzing the overlap…

Disordered Systems and Neural Networks · Physics 2007-05-23 Maximino Aldana

We evaluate the probability that a Boolean network returns to an attractor after perturbing h nodes. We find that the return probability as function of h can display a variety of different behaviours, which yields insights into the…

Statistical Mechanics · Physics 2010-07-02 C. Fretter , B. Drossel

Canalization is a classic concept in Developmental Biology that is thought to be an important feature of evolving systems. In a Boolean network it is a form of network robustness in which a subset of the input signals control the behavior…

Molecular Networks · Quantitative Biology 2015-05-28 Matthew D. Reichl , Kevin E. Bassler

It is an increasingly important problem to study conditions on the structure of a network that guarantee a given behavior for its underlying dynamical system. In this paper we report that a Boolean network may fall within the chaotic…

Molecular Networks · Quantitative Biology 2008-11-04 Winfried Just , German Enciso

Signal transmission delays tend to destabilize dynamical networks leading to oscillation, but their dispersion contributes oppositely toward stabilization. We analyze an integro-differential equation that describes the collective dynamics…

Disordered Systems and Neural Networks · Physics 2008-04-18 Takahiro Omi , Shigeru Shinomoto

Chaos control in Random Boolean networks is implemented by freezing part of the network to drive it from chaotic to ordered phase. However, controlled nodes are only viewed as passive blocks to prevent perturbation spread. This paper…

Cellular Automata and Lattice Gases · Physics 2015-05-20 Nan Jiang , Shijian Chen

In the modeling, monitoring, and control of complex networks, a fundamental problem concerns the comprehensive determination of the state of the system from limited measurements. Using power grids as example networks, we show that this…

Physics and Society · Physics 2013-01-28 Yang Yang , Jianhui Wang , Adilson E. Motter