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In the process of building (structural learning) a probabilistic graphical model from a set of observed data, the directional, cyclic dependencies between the random variables of the model are often found. Existing graphical models such as…

Machine Learning · Computer Science 2023-10-26 Oleksii Sirotkin

Discrete models have a long tradition in engineering, including finite state machines, Boolean networks, Petri nets, and agent-based models. Of particular importance is the question of how the model structure constrains its dynamics. This…

Molecular Networks · Quantitative Biology 2011-08-02 Reinhard Laubenbacher , David Murrugarra , Alan Veliz-Cuba

A model for the dynamical evolution of a granular binary mixture is analyzed. This system is submitted to a tapping procedure, similarly to what is done in real experiments. In the weak vibration limit, an effective dynamics for the tapping…

Statistical Mechanics · Physics 2009-11-10 A. Prados , J. J. Brey

Stochastic dynamical systems arise naturally across nearly all areas of science and engineering. Typically, a dynamical system model is based on some prior knowledge about the underlying dynamics of interest in which probabilistic features…

Computational Engineering, Finance, and Science · Computer Science 2021-09-03 Chao Yin , Xihaier Luo , Ahsan Kareem

This article surveys the variety of ways in which a directed acyclic graph (DAG) can be used to represent a problem of probabilistic causality. For each of these we describe the relevant formal or informal semantics governing that…

Statistics Theory · Mathematics 2024-02-16 Philip Dawid

Many optimization problems can be naturally represented as (hyper) graphs, where vertices correspond to variables and edges to tasks, whose cost depends on the values of the adjacent variables. Capitalizing on the structure of the graph,…

Logic in Computer Science · Computer Science 2015-04-13 Nicklas Hoch , Ugo Montanari , Matteo Sammartino

The inverse problem of designing component interactions to target emergent structure is fundamental to numerous applications in biotechnology, materials science, and statistical physics. Equally important is the inverse problem of designing…

Computational Physics · Physics 2020-11-20 Carl P. Goodrich , Ella M. King , Samuel S. Schoenholz , Ekin D. Cubuk , Michael Brenner

Continuum models for the spatial dynamics of growing cell populations have been widely used to investigate the mechanisms underpinning tissue development and tumour invasion. These models consist of nonlinear partial differential equations…

Tissues and Organs · Quantitative Biology 2019-07-15 Mark AJ Chaplain , Tommaso Lorenzi , Fiona R Macfarlane

Constructions of directed configuration graphs based on a given bi-degree distribution were introduced in random graph theory some years ago. These constructions lead to graphs where the degrees of two nodes belonging to the same edge are…

Probability · Mathematics 2017-01-13 Philippe Deprez , Mario V. Wüthrich

In sustained growth with random dynamics stationary distributions can exist without detailed balance. This suggests thermodynamical behavior in fast growing complex systems. In order to model such phenomena we apply both a discrete and a…

Statistical Mechanics · Physics 2017-03-22 Tamás Biró , Zoltán Néda

Statistical properties of evolving random graphs are analyzed using kinetic theory. Treating the linking process dynamically, structural characteristics such as links, paths, cycles, and components are obtained analytically using the rate…

Statistical Mechanics · Physics 2007-05-23 E. Ben-Naim , P. L. Krapivsky

Weight-balanced and doubly stochastic digraphs are two classes of digraphs that play an essential role in a variety of cooperative control problems, including formation control, distributed averaging, and optimization. We refer to a digraph…

Optimization and Control · Mathematics 2011-10-19 Bahman Gharesifard , Jorge Cortes

Dynamical systems, whether continuous or discrete, are used by physicists in order to study non-linear phenomena. In the case of discrete dynamical systems, one of the most used is the quadratic map depending on a parameter. However, some…

Chaotic Dynamics · Physics 2015-05-20 M. Romera , G. Pastor , M. -F. Danca , A. Martin , A. B. Orue , F. Montoya

We consider a covariant causal set approach to discrete quantum gravity. We first review the microscopic picture of this approach. In this picture a universe grows one element at a time and its geometry is determined by a sequence of…

General Relativity and Quantum Cosmology · Physics 2022-09-01 Stan Gudder

Separated graphs provide a powerful combinatorial tool for approximating dynamical systems. This paper details the explicit construction of Bratteli-like separated graphs -- a generalization of classical Bratteli diagrams -- that encode the…

Dynamical Systems · Mathematics 2026-03-17 Joan Claramunt

We consider stochastic processes indexed by the vertices of an infinite binary tree having a simple recursive structure. The value at any vertex is some fixed function of the values at the two daughter vertices together with some…

Probability · Mathematics 2007-05-23 Jon Warren

Pedestrian trajectory prediction is a challenging task because of the complexity of real-world human social behaviors and uncertainty of the future motion. For the first issue, existing methods adopt fully connected topology for modeling…

Computer Vision and Pattern Recognition · Computer Science 2019-07-25 Lidan Zhang , Qi She , Ping Guo

The model is a particular case of causal set. This is a discrete model of spacetime in a microscopic level. In paper the most general properties of the model are investigated without any reference to a dynamics. The dynamics of the model is…

General Relativity and Quantum Cosmology · Physics 2010-09-01 Alexey L. Krugly

For a directed acyclic graph, there are two known criteria to decide whether any specific conditional independence statement is implied for all distributions factorized according to the given graph. Both criteria are based on special types…

Statistics Theory · Mathematics 2009-04-03 Giovanni M. Marchetti , Nanny Wermuth

In this paper we investigate the geometry of a discrete Bayesian network whose graph is a tree all of whose variables are binary and the only observed variables are those labeling its leaves. We provide the full geometric description of…

Statistics Theory · Mathematics 2011-10-20 Piotr Zwiernik , Jim Q. Smith