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Related papers: A Self-Replicating Peptide Nucleic Acid

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Nucleic acids such as mRNA have emerged as a promising therapeutic modality with the capability of addressing a wide range of diseases. Lipid nanoparticles (LNPs) as a delivery platform for nucleic acids were used in the COVID-19 vaccines…

In the asymptotic limit of a large diffusivity ratio, certain two-component reaction-diffusion (RD) systems can admit localized spike solutions on a 1-D finite domain in a far-from-equilibrium nonlinear regime. It is known that two distinct…

Analysis of PDEs · Mathematics 2024-11-04 Chunyi Gai , Edgardo Villar-Sepulveda , Alan Champneys , Michael J. Ward

Charged-current cross sections are calculated for quasielastic neutrino and antineutrino scattering using a relativistic meson-nucleon model. We examine how nuclear-structure effects, such as relativistic random-phase-approximation (RPA)…

Nuclear Theory · Physics 2009-09-25 Hungchong Kim , J. Piekarewicz , C. J. Horowitz

We present a new simulation technique to study systems of polymers functionalized by reactive sites that bind/unbind forming reversible linkages. Functionalized polymers feature self-assembly and responsive properties that are unmatched by…

Soft Condensed Matter · Physics 2018-04-18 Bernardo Oyarzún , Bortolo Matteo Mognetti

Polypeptide-based diblock copolymers forming either well-defined self-assembled micelles or vesicles after direct dissolution in water or in dichloromethane, have been studied combining light and neutron scattering with electron microscopy…

Meso-scale simulation of structure formation for AB-dimers in solution W monomers was performed by dissipative particle dynamics (DPD) algorithm. As a simulation model, modified Jury Model was adopted Jury, S. et al. "Simulation of…

Soft Condensed Matter · Physics 2007-05-23 Hiroaki Nakamura

Pattern formation induced by wrinkling is a very common phenomenon exhibited in soft-matter substrates. In all these systems wrinkles develop in presence of compressively stressed thin films lying on compliant substrates. Here we…

Mesoscale and Nanoscale Physics · Physics 2019-03-26 Maria Caterina Giordano , Francesco Buatier de Mongeot

A recently proposed model of non-autocatalytic reactions in dipeptide reactions leading to spontaneous symmetry breaking and homochirality is examined. The model is governed by activation, polymerization, epimerization and depolymerization…

Biomolecules · Quantitative Biology 2007-11-01 Axel Brandenburg , Harry J. Lehto , Kirsi M. Lehto

The cytoplasm is a heterogeneous mixture containing many types of proteins that self-assemble into a wide variety of complexes. The accuracy and speed of cytoplasmic self-assembly is astonishing because it involves the correct…

Statistical Mechanics · Physics 2025-11-21 Félix Benoist , Pablo Sartori

Neural Cellular Automata (NCA) are a powerful combination of machine learning and mechanistic modelling. We train NCA to learn complex dynamics from time series of images and PDE trajectories. Our method is designed to identify underlying…

Pattern Formation and Solitons · Physics 2024-04-23 Alex D. Richardson , Tibor Antal , Richard A. Blythe , Linus J. Schumacher

Hydroxyapatite (HAp) [Ca10(PO4)6(OH)2] nanorods were synthesized using a surfactant templating method, with cetyltrimethylammonium bromide (CTAB) micelles acting as template for HAp growth. The effects of the sintering temperature on the…

Materials Science · Physics 2010-06-01 J. M. Coelho , J. Agostinho Moreira , A. Almeida , F. J. Monteiro

Colloidal self-replication represents an exciting research frontier in soft matter physics. Currently, all reported self-replication schemes involve coating colloidal particles with stimuli-responsive molecules to allow switchable…

Soft Condensed Matter · Physics 2015-11-10 J. M. Dempster , R. Zhang , M. Olvera de la Cruz

Self-assembly processes provide the means to achieve scalable and versatile metamaterials by "bottom-up" fabrication. Despite their enormous potential, especially as a platform for energy materials, self-assembled metamaterials are often…

Applied Physics · Physics 2023-03-09 Jelena Wohlwend , Georg Haberfehlner , Henning Galinski

Self-assembling novel ordered structures with nanoparticles has recently received much attention. Here we use computer simulations to study a two-dimensional model system characterized by a simple isotropic interaction that could be…

Soft Condensed Matter · Physics 2015-03-18 Michael Engel

Inspired by protein folding, we explored the construction of three-dimensional structures and machines from one-dimensional chains of simple building blocks. This approach not only allows us to recreate the self-replication mechanism…

Computation and Language · Computer Science 2024-08-15 Ralph P. Lano

We derive a Hamiltonian control theory which can be applied to a 4D symplectic map that models a ring particle accelerator composed of elements with sextupole nonlinearity. The controlled system is designed to exhibit a more regular orbital…

Accelerator Physics · Physics 2011-09-22 J. Boreux , T. Carletti , Ch. Skokos , M. Vittot

Self-regulated actuators harness material intelligence to enable complex deformations and dynamics, representing a significant advancement in automated soft robotics. However, investigations on self-regulated soft actuators, particularly…

Soft Condensed Matter · Physics 2024-12-17 Jingxuan Li , Jiaqi Miao , Alan C. H. Tsang

Magnetic reconnection, especially in the relativistic regime, provides an efficient mechanism for accelerating relativistic particles and thus offers an attractive physical explanation for nonthermal high-energy emission from various…

High Energy Astrophysical Phenomena · Physics 2022-07-15 Dmitri A. Uzdensky

Nanoparticles introduced in living cells are capable of strongly promoting the aggregation of peptides and proteins. We use here molecular dynamics simulations to characterise in detail the process by which nanoparticle surfaces catalyse…

Biomolecules · Quantitative Biology 2010-06-08 Stefan Auer , Antonio Trovato , Michele Vendruscolo

Retrosynthesis, which predicts the reactants of a given target molecule, is an essential task for drug discovery. In recent years, the machine learing based retrosynthesis methods have achieved promising results. In this work, we introduce…

Artificial Intelligence · Computer Science 2023-06-08 Shufang Xie , Rui Yan , Junliang Guo , Yingce Xia , Lijun Wu , Tao Qin