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The forest-of-refinement-trees approach allows for dynamic adaptive mesh refinement (AMR) at negligible cost. While originally developed for quadrilateral and hexahedral elements, previous work established the theory and algorithms for…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-25 David Knapp , Johannes Albrecht Holke , Thomas Spenke , Carsten Burstedde , Lukas Dreyer

Morphological reconstruction (MR) is often employed by seeded image segmentation algorithms such as watershed transform and power watershed as it is able to filter seeds (regional minima) to reduce over-segmentation. However, MR might…

Computer Vision and Pattern Recognition · Computer Science 2019-10-02 Tao Lei , Xiaohong Jia , Tongliang Liu , Shigang Liu , Hongying Meng , Asoke K. Nandi

Various deep learning methods have been proposed to segment breast lesion from ultrasound images. However, similar intensity distributions, variable tumor morphology and blurred boundaries present challenges for breast lesions segmentation,…

Image and Video Processing · Electrical Eng. & Systems 2024-01-23 Gongping Chen , Yu Dai , Jianxun Zhang , Moi Hoon Yap

This paper presents a heterogeneous adaptive mesh refinement (AMR) framework for efficient simulation of moderately stiff reactive problems. This framework features an elaborate subcycling-in-time algorithm along with a specialized…

Computational Physics · Physics 2025-06-04 Yuqi Wang , Yadong Zeng , Ralf Deiterding , Jianhan Liang

We present a new fourth-order, finite-volume hydrodynamics code named Apsara. The code employs a high-order, finite-volume method for mapped coordinates with extensions for nonlinear hyperbolic conservation laws. Apsara can handle arbitrary…

Computational Physics · Physics 2017-01-20 Annop Wongwathanarat , Hannes Grimm-Strele , Ewald Müller

The capability to model the nonlinear magnetohydrodynamic (MHD) evolution of stellarator plasmas is developed by extending the M3D-$C^1$ code to allow non-axisymmetric domain geometry. We introduce a set of logical coordinates, in which the…

Plasma Physics · Physics 2021-07-13 Yao Zhou , N. M. Ferraro , S. C. Jardin , H. R. Strauss

Magnetic fields play an important role in almost all astrophysical phenomena including star formation. But due to the difficulty in analytic modeling and observation, magnetic fields are still poorly studied and numerical simulation has…

Astrophysics · Physics 2009-11-13 Hao Xu , David C. Collins , Michael L. Norman , Shengtai Li , Hui Li

We present a new approach to Eulerian computational fluid dynamics that is designed to work at high Mach numbers encountered in astrophysical hydrodynamic simulations. The Eulerian fluid conservation equations are solved in an adaptive…

Astrophysics · Physics 2009-11-10 Hy Trac , Ue-Li Pen

We present a radiation-hydrodynamics (RHD) scheme that enables 3D simulations resolving both protostellar interiors and their surrounding accretion flows within a single framework, to clarify how a protostar evolves while interacting with…

Solar and Stellar Astrophysics · Physics 2026-02-19 Kazutaka Kimura , Kazuyuki Sugimura , Takashi Hosokawa , Hajime Fukushima , Kazuyuki Omukai

I consider techniques for Berger-Oliger adaptive mesh refinement (AMR) when numerically solving partial differential equations with wave-like solutions, using characteristic (double-null) grids. Such AMR algorithms are naturally recursive,…

General Relativity and Quantum Cosmology · Physics 2015-03-13 Jonathan Thornburg

Equations of ideal magnetohydrodynamics (MHD) play an important role in the studies of turbulence, astrophysics, and plasma physics. These equations possess remarkable geometric structures and symmetries. Indeed, they admit a geodesic…

Mathematical Physics · Physics 2026-03-19 Michael Roop

General-relativistic magnetohydrodynamic (GRMHD) simulations have revolutionized our understanding of black hole accretion. Here, we present a graphics processing unit (GPU) accelerated GRMHD code \hammer{} with multi-faceted optimizations…

High Energy Astrophysical Phenomena · Physics 2022-12-06 M. T. P. Liska , K. Chatterjee , D. Issa , D. Yoon , N. Kaaz , A. Tchekhovskoy , D. van Eijnatten , G. Musoke , C. Hesp , V. Rohoza , S. Markoff , A. Ingram , M. van der Klis

In this paper, we describe a new hydrodynamics code for 1D and 2D astrophysical simulations, BETHE-hydro, that uses time-dependent, arbitrary, unstructured grids. The core of the hydrodynamics algorithm is an arbitrary Lagrangian-Eulerian…

Astrophysics · Physics 2009-11-13 Jeremiah W. Murphy , Adam Burrows

We present a new three-dimensional radiative transfer (RT) code, RADAMESH, based on a ray-tracing, photon-conserving and adaptive (in space and time) scheme. RADAMESH uses a novel Monte Carlo approach to sample the radiation field within…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-19 Sebastiano Cantalupo , Cristiano Porciani

In this era of precision cosmology, a detailed physical understanding on the evolution of cosmic baryons is required. Cosmic magnetic fields, though still poorly understood, may represent an important component in the global cosmic energy…

Astrophysics · Physics 2015-06-24 Shengtai Li , Hui Li , Renyue Cen

Efforts to achieve better accuracy in numerical relativity have so far focused either on implementing second order accurate adaptive mesh refinement or on defining higher order accurate differences and update schemes. Here, we argue for the…

General Relativity and Quantum Cosmology · Physics 2009-11-11 Luis Lehner , Steven L. Liebling , Oscar Reula

We report on the development of a computational framework for the parallel, mesh-adaptive solution of systems of hyperbolic conservation laws like the time-dependent Euler equations in compressible gas dynamics or Magneto-Hydrodynamics…

Computational Physics · Physics 2007-05-23 J. Dreher , R. Grauer

We present the first high order one-step ADER-WENO finite volume scheme with Adaptive Mesh Refinement (AMR) in multiple space dimensions. High order spatial accuracy is obtained through a WENO reconstruction, while a high order one-step…

Numerical Analysis · Mathematics 2015-03-11 Michael Dumbser , Olindo Zanotti , Arturo Hidalgo , Dinshaw S. Balsara

We report on recent extensions and improvements to the Legolas code, which is an open-source, finite element-based numerical framework to solve the linearised (magneto)hydrodynamic equations for a three-dimensional force- and thermally…

Instrumentation and Methods for Astrophysics · Physics 2023-07-20 Niels Claes , Rony Keppens

Radiative transfer has a strong impact on the collapse and the fragmentation of prestellar dense cores. We present the radiation-hydrodynamics solver we designed for the RAMSES code. The method is designed for astrophysical purposes, and in…

Instrumentation and Methods for Astrophysics · Physics 2015-05-27 Benoit Commercon , Romain Teyssier , Edouard Audit , Patrick Hennebelle , Gilles Chabrier