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Bayesian causal discovery aims to infer the posterior distribution over causal models from observed data, quantifying epistemic uncertainty and benefiting downstream tasks. However, computational challenges arise due to joint inference over…

Machine Learning · Computer Science 2023-12-11 Yashas Annadani , Nick Pawlowski , Joel Jennings , Stefan Bauer , Cheng Zhang , Wenbo Gong

DAG (directed acyclic graph) tasks are widely used to model parallel real-time workload. The real-time performance of a DAG task not only depends on its total workload, but also its graph structure. Intuitively, with the same total…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-26 Qingqiang He , Nan Guan , Mingsong Lv

When designing new molecules with particular properties, it is not only important what to make but crucially how to make it. These instructions form a synthesis directed acyclic graph (DAG), describing how a large vocabulary of simple…

Machine Learning · Computer Science 2020-12-22 John Bradshaw , Brooks Paige , Matt J. Kusner , Marwin H. S. Segler , José Miguel Hernández-Lobato

Large scale-free graphs are famously difficult to process efficiently: the skewed vertex degree distribution makes it difficult to obtain balanced partitioning. Our research instead aims to turn this into an advantage by partitioning the…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-10-05 Scott Sallinen , Abdullah Gharaibeh , Matei Ripeanu

Existing score-based methods for directed acyclic graph (DAG) learning from observational data struggle to recover the causal graph accurately and sample-efficiently. To overcome this, in this study, we propose DrBO (DAG recovery via…

Machine Learning · Computer Science 2025-01-28 Bao Duong , Sunil Gupta , Thin Nguyen

In this paper, we tackle structure learning of Directed Acyclic Graphs (DAGs), with the idea of exploiting available prior knowledge of the domain at hand to guide the search of the best structure. In particular, we assume to know the…

Methodology · Statistics 2024-01-19 Thi Kim Hue Nguyen , Monica Chiogna , Davide Risso , Erika Banzato

Python-written data analytics applications can be modeled as and compiled into a directed acyclic graph (DAG) based workflow, where the nodes are fine-grained tasks and the edges are task dependencies. Such analytics workflow jobs are…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-17 Benjamin Carver , Jingyuan Zhang , Ao Wang , Yue Cheng

Causal discovery is a fundamental problem with applications spanning various areas in science and engineering. It is well understood that solely using observational data, one can only orient the causal graph up to its Markov equivalence…

Machine Learning · Computer Science 2024-10-29 Zihan Zhou , Muhammad Qasim Elahi , Murat Kocaoglu

The combinatorial problem of learning directed acyclic graphs (DAGs) from data was recently framed as a purely continuous optimization problem by leveraging a differentiable acyclicity characterization of DAGs based on the trace of a matrix…

Machine Learning · Computer Science 2023-01-18 Kevin Bello , Bryon Aragam , Pradeep Ravikumar

Processing very large graphs like social networks, biological and chemical compounds is a challenging task. Distributed graph processing systems process the billion-scale graphs efficiently but incur overheads of efficient partitioning and…

Data Structures and Algorithms · Computer Science 2014-01-13 Kamran Najeebullah , Kifayat Ullah Khan , Waqas Nawaz , Young-Koo Lee

Partitioning graphs into blocks of roughly equal size such that few edges run between blocks is a frequently needed operation in processing graphs. Recently, size, variety, and structural complexity of these networks has grown dramatically.…

Data Structures and Algorithms · Computer Science 2018-10-16 Yaroslav Akhremtsev , Peter Sanders , Christian Schulz

The graph isomorphism is to determine whether two graphs are isomorphic. A closely related problem is automorphism detection, where an isomorphism between two graphs is a bijection between their vertex sets that preserves adjacency, and an…

Social and Information Networks · Computer Science 2019-11-18 Can Lu , Jeffrey Xu Yu , Zhiwei Zhang , Hong Cheng

The dynamic scaling of distributed computations plays an important role in the utilization of elastic computational resources, such as the cloud. It enables the provisioning and de-provisioning of resources to match dynamic resource…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-19 Masatoshi Hanai , Nikos Tziritas , Toyotaro Suzumura , Wentong Cai , Georgios Theodoropoulos

Parallelization and External Memory (PEM) techniques have significantly enhanced the capabilities of search algorithms when solving large-scale problems. Previous research on PEM has primarily centered on unidirectional algorithms, with…

Artificial Intelligence · Computer Science 2025-01-06 Lior Siag , Shahaf S. Shperberg , Ariel Felner , Nathan R. Sturtevant

In many situations, it would be useful to know not just the best phylogenetic tree for a given data set, but the collection of high-quality trees. This goal is typically addressed using Bayesian techniques, however, current Bayesian methods…

Populations and Evolution · Quantitative Biology 2023-10-27 Will Dumm , Mary Barker , William Howard-Snyder , William S. DeWitt , Frederick A. Matsen

A recent approach to building consensus protocols on top of Directed Acyclic Graphs (DAGs) shows much promise due to its simplicity and stable throughput. However, as each node in the DAG typically includes a linear number of references to…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-03 Michael Anoprenko , Andrei Tonkikh , Alexander Spiegelman , Petr Kuznetsov , Anatoliy Zinovyev , Konstantin Shprenger

Directed Acyclic Graphs (DAGs) are central to uncovering causal structure in complex systems, yet learning a single DAG from data is often challenging: model uncertainty, finite samples, and a combinatorially large search space frequently…

Methodology · Statistics 2026-05-19 Yunan Wu , Yue Wang , Chunlin Li , Chenglong Ye

In this paper, we propose a characterization of chordal bipartite graphs and an efficient enumeration algorithm for chordal bipartite induced subgraphs. A chordal bipartite graph is a bipartite graph without induced cycles with length six…

Data Structures and Algorithms · Computer Science 2020-09-23 Kazuhiro Kurita , Kunihiro Wasa , Hiroki Arimura , Takeaki Uno

We analyse some QR decomposition algorithms, and show that the I/O complexity of the tile based algorithm is asymptotically the same as that of matrix multiplication. This algorithm, we show, performs the best when the tile size is chosen…

Data Structures and Algorithms · Computer Science 2010-06-08 Sraban Kumar Mohanty

Estimating the structure of directed acyclic graphs (DAGs) from observational data remains a significant challenge in machine learning. Most research in this area concentrates on learning a single DAG for the entire population. This paper…

Machine Learning · Statistics 2024-02-21 Ryan Thompson , Edwin V. Bonilla , Robert Kohn
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