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We introduce a variation of the scheduling with precedence constraints problem that has applications to molecular folding and production management. We are given a bipartite graph $H=(B,S)$. Vertices in $B$ are thought of as goods or…

Discrete Mathematics · Computer Science 2016-10-04 Akbar Rafiey , Jeff Kinne , Ján Manuch , Arash Rafiey

Finding a maximum clique in a given graph is one of the fundamental NP-hard problems. We compare two multi-core thread-parallel adaptations of a state-of-the-art branch and bound algorithm for the maximum clique problem, and provide a novel…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-09-05 Ciaran McCreesh , Patrick Prosser

Two kinds of approximation algorithms exist for the k-BALANCED PARTITIONING problem: those that are fast but compute unsatisfying approximation ratios, and those that guarantee high quality ratios but are slow. In this paper we prove that…

Computational Complexity · Computer Science 2019-04-29 Andreas Emil Feldmann

Traditional representations of graphs and their duals suggest the requirement that the dual vertices be placed inside their corresponding primal faces, and the edges of the dual graph cross only their corresponding primal edges. We consider…

Computational Geometry · Computer Science 2007-05-23 C. Erten , S. G. Kobourov

The problem Level Planarity asks for a crossing-free drawing of a graph in the plane such that vertices are placed at prescribed y-coordinates (called levels) and such that every edge is realized as a y-monotone curve. In the variant…

Data Structures and Algorithms · Computer Science 2024-04-26 Boris Klemz , Marie Diana Sieper

In the point set embeddability problem, we are given a plane graph $G$ with $n$ vertices and a point set $S$ with $n$ points. Now the goal is to answer the question whether there exists a straight-line drawing of $G$ such that each vertex…

Computational Geometry · Computer Science 2020-05-13 Tanaeem M. Moosa , M. Sohel Rahman

In the Partially Embedded Planarity problem, we are given a graph $G$ together with a topological drawing of a subgraph $H$ of $G$. The task is to decide whether the drawing can be extended to a drawing of the whole graph such that no two…

Computational Geometry · Computer Science 2024-10-18 Simon D. Fink , Ignaz Rutter , Sandhya T. P

This paper presents PIPQ, a strict and linearizable concurrent priority queue whose design differs from existing solutions in literature because it focuses on enabling parallelism of insert operations as opposed to accelerating delete-min…

Data Structures and Algorithms · Computer Science 2025-08-25 Olivia Grimes , Ahmed Hassan , Panagiota Fatourou , Roberto Palmieri

A vertex-subset graph problem $Q$ defines which subsets of the vertices of an input graph are feasible solutions. The reconfiguration version of a vertex-subset problem $Q$ asks whether it is possible to transform one feasible solution for…

Computational Complexity · Computer Science 2014-09-30 Amer E. Mouawad , Naomi Nishimura , Venkatesh Raman , Marcin Wrochna

PQ-trees and PC-trees are data structures that represent sets of linear and circular orders, respectively, subject to constraints that specific subsets of elements have to be consecutive. While equivalent to each other, PC-trees are…

Data Structures and Algorithms · Computer Science 2021-06-29 Simon D. Fink , Matthias Pfretzschner , Ignaz Rutter

In the matching interdiction problem, we are given an undirected graph with weights and interdiction costs on the edges and seek to remove a subset of the edges constrained to some budget, such that the weight of a maximum weight matching…

Discrete Mathematics · Computer Science 2008-04-23 Rico Zenklusen

Given a multigraph $G$ whose edges are colored from the set $[q]:=\{1,2,\ldots,q\}$ (\emph{$q$-colored graph}), and a vector $\alpha=(\alpha_1,\ldots,\alpha_{q}) \in \mathbb{N}^{q}$ (\emph{color-constraint}), a subgraph $H$ of $G$ is called…

Data Structures and Algorithms · Computer Science 2025-03-19 P. S. Ardra , Jasine Babu , R. Krithika , Deepak Rajendraprasad

The central theorem of topological graph theory states that the graph minor relation is a well-quasi-order on graphs. It has far-reaching consequences, in particular in the study of graph structures and the design of (parameterized)…

Computational Geometry · Computer Science 2025-12-04 Corentin Lunel , Clément Maria

Graph packing and partitioning problems have been studied in many contexts, including from the algorithmic complexity perspective. Consider the packing problem of determining whether a graph contains a spanning tree and a cycle that do not…

Combinatorics · Mathematics 2014-09-09 Jed Yang

A square coloring of a graph $G$ is a coloring of the square $G^2$ of $G$, that is, a coloring of the vertices of $G$ such that any two vertices that are at distance at most $2$ in $G$ receive different colors. We investigate the complexity…

Data Structures and Algorithms · Computer Science 2022-11-09 Akanksha Agrawal , Dániel Marx , Daniel Neuen , Jasper Slusallek

This paper introduces the Simultaneous assignment problem. Let us given a graph with a weight and a capacity function on its edges, and a set of its subgraphs along with a degree upper bound function for each of them. We are also given a…

Data Structures and Algorithms · Computer Science 2023-01-24 Péter Madarasi

We consider here the problem of chaining seeds in ordered trees. Seeds are mappings between two trees Q and T and a chain is a subset of non overlapping seeds that is consistent with respect to postfix order and ancestrality. This problem…

Quantitative Methods · Quantitative Biology 2015-05-19 Julien Allali , Cédric Chauve , Pascal Ferraro , Anne-Laure Gaillard

In this paper, we consider a transformation of $k$ disjoint paths in a graph. For a graph and a pair of $k$ disjoint paths $\mathcal{P}$ and $\mathcal{Q}$ connecting the same set of terminal pairs, we aim to determine whether $\mathcal{P}$…

Data Structures and Algorithms · Computer Science 2022-10-24 Takehiro Ito , Yuni Iwamasa , Naonori Kakimura , Yusuke Kobayashi , Shun-ichi Maezawa , Yuta Nozaki , Yoshio Okamoto , Kenta Ozeki

As data are increasingly modeled as graphs for expressing complex relationships, the tree pattern query on graph-structured data becomes an important type of queries in real-world applications. Most practical query languages, such as XQuery…

Databases · Computer Science 2015-03-19 Qiang Zeng , Xiaorui Jiang , Hai Zhuge

This paper explores the application of a new algebraic method of edge coloring, called complex coloring, to the scheduling problems of input queued switches. The proposed distributed parallel scheduling algorithm possesses two important…

Networking and Internet Architecture · Computer Science 2016-06-24 Lingkang Wang , Tong Ye , Tony T. Lee , Weisheng Hu