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This paper describes the adaptation of a well-scaling parallel algorithm for computing Morse-Smale segmentations based on path compression to a distributed computational setting. Additionally, we extend the algorithm to efficiently compute…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-09 Michael Will , Jonas Lukasczyk , Julien Tierny , Christoph Garth

This paper describes substantial advances in the analysis (parsing) of diagrams using constraint grammars. The addition of set types to the grammar and spatial indexing of the data make it possible to efficiently parse real diagrams of…

cmp-lg · Computer Science 2008-02-03 Robert P. Futrelle , Nikos Nikolakis

Current tabling systems suffer from an increase in space complexity, time complexity or both when dealing with sequences due to the use of data structures for tabled subgoals and answers and the need to copy terms into and from the table…

Programming Languages · Computer Science 2012-10-08 Neng-Fa Zhou , Christian Theil Have

Real-world data often comes in compressed form. Analyzing compressed data directly (without decompressing it) can save space and time by orders of magnitude. In this work, we focus on fundamental sequence comparison problems and try to…

Data Structures and Algorithms · Computer Science 2021-12-14 Arun Ganesh , Tomasz Kociumaka , Andrea Lincoln , Barna Saha

Given a dynamic set $K$ of $k$ strings of total length $n$ whose characters are drawn from an alphabet of size $\sigma$, a keyword dictionary is a data structure built on $K$ that provides locate, prefix search, and update operations on…

Data Structures and Algorithms · Computer Science 2020-10-08 Kazuya Tsuruta , Dominik Köppl , Shunsuke Kanda , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

We present a data structure that stores a sequence $s[1..n]$ over alphabet $[1..\sigma]$ in $n\Ho(s) + o(n)(\Ho(s){+}1)$ bits, where $\Ho(s)$ is the zero-order entropy of $s$. This structure supports the queries \access, \rank\ and \select,…

Data Structures and Algorithms · Computer Science 2012-04-03 Jeremy Barbay , Francisco Claude , Travis Gagie , Gonzalo Navarro , Yakov Nekrich

Most of the fastest-growing string collections today are repetitive, that is, most of the constituent documents are similar to many others. As these collections keep growing, a key approach to handling them is to exploit their…

Information Retrieval · Computer Science 2017-05-22 Travis Gagie , Aleksi Hartikainen , Kalle Karhu , Juha Kärkkäinen , Gonzalo Navarro , Simon J. Puglisi , Jouni Sirén

In the last decades, the necessity to process massive amounts of textual data fueled the development of compressed text indexes: data structures efficiently answering queries on a given text while occupying space proportional to the…

Data Structures and Algorithms · Computer Science 2024-09-24 Dominik Kempa , Tomasz Kociumaka

The success of deep neural networks in many real-world applications is leading to new challenges in building more efficient architectures. One effective way of making networks more efficient is neural network compression. We provide an…

Machine Learning · Computer Science 2019-12-23 Andrey Kuzmin , Markus Nagel , Saurabh Pitre , Sandeep Pendyam , Tijmen Blankevoort , Max Welling

Real-world point sets tend to be clustered, so using a machine word for each point is wasteful. In this paper we first show how a compact representation of quadtrees using $\Oh{1}$ bits per node can break this bound on clustered point sets,…

Data Structures and Algorithms · Computer Science 2021-12-10 Guillermo de Bernardo , Travis Gagie , Susana Ladra , Gonzalo Navarro , Diego Seco

The most fundamental problem considered in algorithms for text processing is pattern matching: given a pattern $p$ of length $m$ and a text $t$ of length $n$, does $p$ occur in $t$? Multiple versions of this basic question have been…

Data Structures and Algorithms · Computer Science 2021-11-10 Moses Ganardi , Paweł Gawrychowski

The suffix array is a classic full-text index, combining effectiveness with simplicity. We discuss three approaches aiming to improve its efficiency even more: changes to the navigation, data layout and adding extra data. In short, we show…

Data Structures and Algorithms · Computer Science 2016-07-28 Tomasz Kowalski , Szymon Grabowski , Kimmo Fredriksson , Marcin Raniszewski

We describe a data structure that stores a string $S$ in space similar to that of its Lempel-Ziv encoding and efficiently supports access, rank and select queries. These queries are fundamental for implementing succinct and compressed data…

Data Structures and Algorithms · Computer Science 2014-12-03 Djamal Belazzougui , Travis Gagie , Paweł Gawrychowski , Juha Kärkkäinen , Alberto Ordóñez , Simon J. Puglisi , Yasuo Tabei

A compressed full-text self-index represents a text in a compressed form and still answers queries efficiently. This technology represents a breakthrough over the text indexing techniques of the previous decade, whose indexes required…

Data Structures and Algorithms · Computer Science 2007-12-21 Paolo Ferragina , Rodrigo Gonzalez , Gonzalo Navarro , Rossano Venturini

Tensor decomposition on big data has attracted significant attention recently. Among the most popular methods is a class of algorithms that leverages compression in order to reduce the size of the tensor and potentially parallelize…

Machine Learning · Computer Science 2018-11-20 Georgios Tsitsikas , Evangelos E. Papalexakis

We perform experimental studies on data structures that answer path median, path counting, and path reporting queries in weighted trees. These query problems generalize the well-known range median query problem in arrays, as well as the…

Data Structures and Algorithms · Computer Science 2020-04-21 Meng He , Serikzhan Kazi

In terms of signal samples, we propose and justify a new rank reduced multi-term transform, abbreviated as MTT, which, under certain conditions, may provide better-associated accuracy than that of known optimal rank reduced transforms. The…

Optimization and Control · Mathematics 2021-11-11 Pablo Soto-Quiros , Anatoli Torokhti

Tensor train (TT) decomposition is a powerful representation for high-order tensors, which has been successfully applied to various machine learning tasks in recent years. However, since the tensor product is not commutative, permutation of…

Numerical Analysis · Computer Science 2017-05-31 Qibin Zhao , Masashi Sugiyama , Andrzej Cichocki

Graph compression is a data analysis technique that consists in the replacement of parts of a graph by more general structural patterns in order to reduce its description length. It notably provides interesting exploration tools for the…

Data Structures and Algorithms · Computer Science 2018-07-19 Robin Lamarche-Perrin

Today, with the growing demands of information storage and data transfer, data compression is becoming increasingly important. Data Compression is a technique which is used to decrease the size of data. This is very useful when some huge…

Information Theory · Computer Science 2025-06-13 Mohammad Hosseini
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