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High-throughput spectrometers are capable of producing data sets containing thousands of spectra for a single biological sample. These data sets contain a substantial amount of redundancy from peptides that may get selected multiple times…

Data Structures and Algorithms · Computer Science 2013-01-08 Fahad Saeed , Trairak Pisitkun , Mark A. Knepper , Jason D. Hoffert

Constrained clustering has been well-studied for algorithms such as $K$-means and hierarchical clustering. However, how to satisfy many constraints in these algorithmic settings has been shown to be intractable. One alternative to encode…

Machine Learning · Computer Science 2012-09-24 Xiang Wang , Buyue Qian , Ian Davidson

Spectral clustering has become one of the most popular algorithms in data clustering and community detection. We study the performance of classical two-step spectral clustering via the graph Laplacian to learn the stochastic block model.…

Machine Learning · Statistics 2020-04-22 Shaofeng Deng , Shuyang Ling , Thomas Strohmer

Spectral clustering is a fundamental technique in the field of data mining and information processing. Most existing spectral clustering algorithms integrate dimensionality reduction into the clustering process assisted by manifold learning…

Machine Learning · Computer Science 2014-11-25 Xiaojun Chang , Feiping Nie , Zhigang Ma , Yi Yang , Xiaofang Zhou

Consistency is a key property of all statistical procedures analyzing randomly sampled data. Surprisingly, despite decades of work, little is known about consistency of most clustering algorithms. In this paper we investigate consistency of…

Statistics Theory · Mathematics 2008-12-18 Ulrike von Luxburg , Mikhail Belkin , Olivier Bousquet

The unsupervised learning of community structure, in particular the partitioning vertices into clusters or communities, is a canonical and well-studied problem in exploratory graph analysis. However, like most graph analyses the…

Machine Learning · Computer Science 2020-07-27 Benjamin W. Priest , Alec Dunton , Geoffrey Sanders

Spectral clustering is a fast and popular algorithm for finding clusters in networks. Recently, Chaudhuri et al. (2012) and Amini et al.(2012) proposed inspired variations on the algorithm that artificially inflate the node degrees for…

Machine Learning · Statistics 2013-09-18 Tai Qin , Karl Rohe

Spectral clustering methods have gained widespread recognition for their effectiveness in clustering high-dimensional data. Among these techniques, constrained spectral clustering has emerged as a prominent approach, demonstrating enhanced…

Machine Learning · Computer Science 2024-04-05 Swarup Ranjan Behera , Vijaya V. Saradhi

Urban structure detection is a basic task in urban geography. Clustering is a core technology to detect the patterns of urban spatial structure, urban functional region, and so on. In big data era, diverse urban sensing datasets recording…

Social and Information Networks · Computer Science 2017-07-13 Xin Lin , Haifeng Li , Yan Zhang , Lei Gao , Ling Zhao , Min Deng

Clustering in image analysis is a central technique that allows to classify elements of an image. We describe a simple clustering technique that uses the method of similarity matrices. We expand upon recent results in spectral analysis for…

Statistics Theory · Mathematics 2022-03-23 Denis Gaidashev , Ralf Pihlström , Martin Ryner

Spectral clustering (SC) is a popular clustering technique to find strongly connected communities on a graph. SC can be used in Graph Neural Networks (GNNs) to implement pooling operations that aggregate nodes belonging to the same cluster.…

Machine Learning · Computer Science 2021-01-01 Filippo Maria Bianchi , Daniele Grattarola , Cesare Alippi

This work studies the classical spectral clustering algorithm which embeds the vertices of some graph $G=(V_G, E_G)$ into $\mathbb{R}^k$ using $k$ eigenvectors of some matrix of $G$, and applies $k$-means to partition $V_G$ into $k$…

Data Structures and Algorithms · Computer Science 2022-08-04 Peter Macgregor , He Sun

Our problem of interest is to cluster vertices of a graph by identifying underlying community structure. Among various vertex clustering approaches, spectral clustering is one of the most popular methods because it is easy to implement…

Machine Learning · Statistics 2020-09-23 Congyuan Yang , Carey E. Priebe , Youngser Park , David J. Marchette

In this paper we propose a new approach to detect clusters in undirected graphs with attributed vertices. We incorporate structural and attribute similarities between the vertices in an augmented graph by creating additional vertices and…

Machine Learning · Computer Science 2023-02-07 Pasqua D'Ambra , Panayot S. Vassilevski , Luisa Cutillo

Spectral clustering is a leading clustering method. Two of its major shortcomings are the disjoint optimization process and the limited representation capacity. To address these issues, we propose a deep spectral clustering model (named…

Computer Vision and Pattern Recognition · Computer Science 2025-08-07 Wengang Guo , Wei Ye , Chunchun Chen , Xin Sun , Christian Böhm , Claudia Plant , Susanto Rahardja

This paper studies clustering algorithms for dynamically evolving graphs $\{G_t\}$, in which new edges (and potential new vertices) are added into a graph, and the underlying cluster structure of the graph can gradually change. The paper…

Data Structures and Algorithms · Computer Science 2024-06-06 Steinar Laenen , He Sun

Observational data usually comes with a multimodal nature, which means that it can be naturally represented by a multi-layer graph whose layers share the same set of vertices (users) with different edges (pairwise relationships). In this…

Machine Learning · Computer Science 2015-08-31 Xiaowen Dong , Pascal Frossard , Pierre Vandergheynst , Nikolai Nefedov

Spectral Clustering(SC) is a prominent data clustering technique of recent times which has attracted much attention from researchers. It is a highly data-driven method and makes no strict assumptions on the structure of the data to be…

Machine Learning · Computer Science 2019-09-18 Lalith Srikanth Chintalapati , Raghunatha Sarma Rachakonda

The present paper is devoted to clustering geometric graphs. While the standard spectral clustering is often not effective for geometric graphs, we present an effective generalization, which we call higher-order spectral clustering. It…

Machine Learning · Computer Science 2021-03-16 Konstantin Avrachenkov , Andrei Bobu , Maximilien Dreveton

Spectral Method is a commonly used scheme to cluster data points lying close to Union of Subspaces by first constructing a Random Geometry Graph, called Subspace Clustering. This paper establishes a theory to analyze this method. Based on…

Machine Learning · Computer Science 2019-07-26 Gen Li , Yuantao Gu