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Recent advances in both theory and computational power have created opportunities to simulate biomolecular processes more efficiently using adaptive ensemble simulations. Ensemble simulations are now widely used to compute a number of…

Quantitative Methods · Quantitative Biology 2018-09-27 Peter M. Kasson , Shantenu Jha

A numerical framework is developed to solve various types of PDEs on complicated domains, including steady and time-dependent, non-linear and non-local PDEs, with different boundary conditions that can also include non-linear and non-local…

Numerical Analysis · Mathematics 2022-07-13 Jonna C. Roden , Rory D. Mills-Williams , John W. Pearson , Benjamin D. Goddard

We present the Cosmology and Astrophysics with MachinE Learning Simulations --CAMELS-- project. CAMELS is a suite of 4,233 cosmological simulations of $(25~h^{-1}{\rm Mpc})^3$ volume each: 2,184 state-of-the-art (magneto-)hydrodynamic…

Developing and testing novel control and motion planning algorithms for aerial vehicles can be a challenging task, with the robotics community relying more than ever on 3D simulation technologies to evaluate the performance of new…

A large scientific community depends on the precise modelling of complex processes in particle cascades in various types of matter. These models are used most prevalently in cosmic-ray physics, astrophysical-neutrino physics, and gamma-ray…

Instrumentation and Methods for Astrophysics · Physics 2018-12-20 Ralph Engel , Dieter Heck , Tim Huege , Tanguy Pierog , Maximilian Reininghaus , Felix Riehn , Ralf Ulrich , Michael Unger , Darko Veberič

We develop the Mechanic package, which is a new numerical framework for dynamical astronomy. The aim of our software is to help in massive numerical simulations by efficient task management and unified data storage. The code is built on top…

Instrumentation and Methods for Astrophysics · Physics 2012-03-01 Mariusz Slonina , Krzysztof Gozdziewski , Cezary Migaszewski

FLAME is a software package to perform a wide range of atomistic simulations for exploring the potential energy surfaces (PES) of complex condensed matter systems. The range of methods include molecular dynamics simulations to sample free…

Simulation has become the evaluation method of choice for many areas of distributing computing research. However, most existing simulation packages have several limitations on the size and complexity of the system being modeled. Fine…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-07-01 Dobre Ciprian , Cristea Valentin , Iosif C. Legrand

The programmable metasurface is regarded as one of the most promising transformative technologies for next-generation wireless system applications. Due to the lack of effective perception ability of the external electromagnetic environment,…

We describe the AMReX suite of astrophysics codes and their application to modeling problems in stellar astrophysics. Maestro is tuned to efficiently model subsonic convective flows while Castro models the highly compressible flows…

Instrumentation and Methods for Astrophysics · Physics 2019-01-07 M. Zingale , A. S. Almgren , M. G. Barrios Sazo , V. E. Beckner , J. B. Bell , B. Friesen , A. M. Jacobs , M. P. Katz , C. M. Malone , A. J. Nonaka , D. E. Willcox , W. Zhang

A template-based generic programming approach was presented in a previous paper that separates the development effort of programming a physical model from that of computing additional quantities, such as derivatives, needed for embedded…

Mathematical Software · Computer Science 2012-05-18 Roger P. Pawlowski , Eric T. Phipps , Andrew G. Salinger , Steven J. Owen , Christopher M. Siefert , Matthew L. Staten

To reduce and analyze astronomical images, astronomers can rely on a wide range of libraries providing low-level implementations of legacy algorithms. However, combining these routines into robust and functional pipelines requires a major…

Instrumentation and Methods for Astrophysics · Physics 2021-11-17 Lionel J. Garcia , Mathilde Timmermans , Francisco J. Pozuelos , Elsa Ducrot , Michaël Gillon , Laetitia Delrez , Robert D. Wells , Emmanuël Jehin

Upcoming and future astronomy research facilities will systematically generate terabyte-sized data sets moving astronomy into the Petascale data era. While such facilities will provide astronomers with unprecedented levels of accuracy and…

Instrumentation and Methods for Astrophysics · Physics 2011-11-30 A. H. Hassan , C. J. Fluke , D. G. Barnes

Today's astronomical projects need computational systems capable to store and analyze large amounts of scientific data, to effectively share data with other research Institutes and to easily implement information services to present data…

Astrophysics · Physics 2007-05-23 G. Calderone , L. Nicastro

Characterizing stellar convection in multiple dimensions is a topic at the forefront of stellar astrophysics. Numerical simulations are an essential tool for this task. We present an extension of the existing numerical tool-kit A-MaZe that…

Solar and Stellar Astrophysics · Physics 2019-10-09 M. V. Popov , R. Walder , D. Folini , T. Goffrey , I. Baraffe , T. Constantino , C. Geroux , J. Pratt , M. Viallet

We introduce statistical techniques required to handle complex computer models with potential applications to astronomy. Computer experiments play a critical role in almost all fields of scientific research and engineering. These computer…

Instrumentation and Methods for Astrophysics · Physics 2021-09-01 Joshua Lukemire , Qian Xiao , Abhyuday Mandal , Weng Kee Wong

Global variations in terrain appearance raise a major challenge for satellite image analysis, leading to poor model performance when training on locations that differ from those encountered at test time. This remains true even with recent…

Computer Vision and Pattern Recognition · Computer Science 2025-04-29 Abhishek Kuriyal , Elliot Vincent , Mathieu Aubry , Loic Landrieu

An integrated computational framework is introduced to study complex engineering systems through physics-based ensemble simulations on heterogeneous supercomputers. The framework is primarily designed for the quantitative assessment of…

Computational Engineering, Finance, and Science · Computer Science 2022-02-08 Kazuki Maeda , Thiago Teixeira , Jonathan M. Wang , Jeffrey M. Hokanson , Caetano Melone , Mario Di Renzo , Steve Jones , Javier Urzay , Gianluca Iaccarino

Simulation ensembles are a common tool in physics for understanding how a model outcome depends on input parameters. We analyze an active particle system, where each particle can use energy from its surroundings to propel itself. A…

Human-Computer Interaction · Computer Science 2023-03-21 Marina Evers , Raphael Wittkowski , Lars Linsen

Modelling & Simulation (M&S) is broadly used in real scenarios where making physical modifications could be highly expensive. With the so-called Simulation Software-as-a-Service (SimSaaS), researchers could take advantage of the huge amount…

Multiagent Systems · Computer Science 2016-02-01 Tiago Azevedo , Rosaldo J. F. Rossetti , Jorge G. Barbosa
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