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Many systems in nature, from ferromagnets to flocks of birds, exhibit ordering phenomena on the large scale. In physical systems order is statistically robust for large enough dimensions, with relative fluctuations due to noise vanishing…

Statistical Mechanics · Physics 2017-04-05 Andrea Cavagna , Irene Giardina , Asja Jelic , Edmondo Silvestri , Massimiliano Viale

Microorganisms live in environments that inevitably fluctuate between mild and harsh conditions. As harsh conditions may cause extinctions, the rate at which fluctuations occur can shape microbial communities and their diversity, but we…

Populations and Evolution · Quantitative Biology 2021-10-14 Shota Shibasaki , Mauro Mobilia , Sara Mitri

Fluctuations in the abundance of molecules in the living cell may affect its growth and well being. For regulatory molecules (e.g., signaling proteins or transcription factors), fluctuations in their expression can affect the levels of…

Molecular Networks · Quantitative Biology 2009-11-13 Erel Levine , Terence Hwa

We consider the effects of long-range temporal correlations in many-particle systems, focusing particularly on fluctuations about the typical behaviour. For a specific class of memory dependence we discuss the modification of the large…

Statistical Mechanics · Physics 2015-12-24 Rosemary J. Harris

Fluctuations are inherent to biological systems, arising from the stochastic nature of molecular interactions, and influence various aspects of system behavior, stability, and robustness. These fluctuations can be categorized as intrinsic,…

Molecular Networks · Quantitative Biology 2024-08-23 Manuel Eduardo Hernández-García , Mariana Gómez-Schiavon , Jorge Velázquez-Castro

Energy transfer plays a vital role in many natural and technological processes. In this work, we study the effects of mechanical motion on the excitation transfer through a chain of interacting molecules with application to biological…

Much of interesting complex biological behaviour arises from collective properties. Important information about collective behaviour lies in the time and space structure of fluctuations around average properties, and two-point correlation…

Quantitative Methods · Quantitative Biology 2022-02-17 Tomás S. Grigera

Fluctuating pairwise interactions are understood to drive fluid-like states in dense biological systems. These states find a broad range of functionalities, such as directing growth during morphogenesis and forming aggregates with…

Statistical Mechanics · Physics 2025-09-10 Emir Sezik , Henry Alston , Thibault Bertrand

Theoretical and experimental studies have shown that the fluctuations of in vivo systems break the fluctuation-dissipation theorem. One can thus ask what information is contained in the correlation functions of protein concentrations and…

Chemical Physics · Physics 2016-08-24 Hélène Berthoumieux

A weak correlation between the diffusion-exponent fluctuations and the temperature fluctuations is discussed based on recent experimental observations for protein diffusion inside bacteria. Its existence is shown to be essential for…

Statistical Mechanics · Physics 2021-12-09 Yuichi Itto , Christian Beck

Event-by-event fluctuations and correlations between particles produced in relativistic nuclear collisions are studied. The fluctuations in positive, negative, total and net charge are closely related through correlations. In the event of a…

Nuclear Theory · Physics 2008-11-26 H. Heiselberg , A. D. Jackson

In complex ecosystems such as microbial communities, there is constant ecological and evolutionary feedback between the residing species and the environment occurring on concurrent timescales. Species respond and adapt to their surroundings…

Populations and Evolution · Quantitative Biology 2023-10-17 Jim Wu , David J. Schwab , Trevor GrandPre

Trail interactions occur when past particle trajectories bias future motion, rendering the system out of thermodynamic equilibrium. While such systems are abundant in nature, their understanding is limited to the single-particle level or…

Statistical Mechanics · Physics 2025-12-04 Paul Pineau , Samuel Bell , Raphaël Voituriez , Ram M. Adar

The energy transfer processes and coherent phenomena in the fucoxanthin-chlorophyll protein complex, which is responsible for the light harvesting function in marine algae diatoms, were investigated at 77 K by using two-dimensional…

We study the role of noise on the nature of the transition to collective motion in dry active matter. Starting from field theories that predict a continuous transition at the deterministic level, we show that fluctuations induce a…

Soft Condensed Matter · Physics 2021-04-12 David Martin , Hugues Chaté , Cesare Nardini , Alexandre Solon , Julien Tailleur , Frédéric van Wijland

Population dynamics deals with the collective phenomena of living organisms, and it has attracted much attention since it is expected to explain how not only living organisms but also human beings have been adapted to varying environments.…

Statistical Mechanics · Physics 2019-04-23 Hideyuki Miyahara

In this paper we consider dynamics of a molecular system subjected to external pumping by a light source. Within a completely quantum mechanical treatment, we derive a general formula, which enables to asses effects of different light…

Biological Physics · Physics 2012-01-30 Tomas Mancal , Leonas Valkunas

Quantum scattering is used ubiquitously in both experimental and theoretical physics across a wide range of disciplines, from high-energy physics to mesoscopic physics. In this work, we uncover universal relations for the energy…

Quantum Physics · Physics 2024-11-15 Samuel L. Jacob , John Goold , Gabriel T. Landi , Felipe Barra

Understanding the interplay among processes that occur over different timescales is a challenging issue in the physics of systems regulation. In gene regulation, the timescales for changes in chromatin states can differ from those for…

Biological Physics · Physics 2025-07-01 Masaki Sasai , Bhaswati Bhattacharyya , Shin Fujishiro , Yoshiaki Horiike

The transport of individual entities through interconnected structures is a process of practical relevance both in biology and technology. Examples are given by diffusive dynamics of molecules in porous structures. In soft environments,…

Soft Condensed Matter · Physics 2026-02-09 Jakob Mihatsch , Andreas M. Menzel