Related papers: Maximum Bounded Rooted-Tree Packing Problem
In this paper, we study the maximum matching problem in RDV graphs, i.e., graphs that are vertex-intersection graphs of downward paths in a rooted tree. We show that this problem can be reduced to a problem of testing (repeatedly) whether a…
In a classical covering problem, we are given a set of requests that we need to satisfy (fully or partially), by buying a subset of items at minimum cost. For example, in the k-MST problem we want to find the cheapest tree spanning at least…
Given a tree $T$ on $n$ vertices, and $k, b, s_1, \ldots, s_b \in N$, the Tree Partitioning problem asks if at most $k$ edges can be removed from $T$ so that the resulting components can be grouped into $b$ groups such that the number of…
We consider the minimum spanning tree (MST) problem under the restriction that for every vertex v, the edges of the tree that are adjacent to v satisfy a given family of constraints. A famous example thereof is the classical…
The problem of computing all maximal induced subgraphs of a graph G that have a graph property P, also called the maximal P-subgraphs problem, is considered. This problem is studied for hereditary, connected-hereditary and rooted-hereditary…
In this paper we consider the problem of computing an mRNA sequence of maximal similarity for a given mRNA of secondary structure constraints, introduced by Backofen et al. in [BNS02] denoted as the MRSO problem. The problem is known to be…
We consider the well-studied problem of finding a spanning tree with minimum average distance between vertex pairs (called a MAD tree). This is a classic network design problem which is known to be NP-hard. While approximation algorithms…
A network for the transportation of supplies can be described as a rooted tree with a weight of a degree of congestion for each edge. We take the sum of root-leaf distance (SRD) on a rooted tree as the whole degree of congestion of the…
The classical NP-complete problem Vertex Cover requires us to determine whether a graph contains at most $k$ vertices that cover all edges. In spite of its intractability, the problem can be solved in FPT time for parameter $k$ by various…
Characterization of joint probability distribution for large networks of random variables remains a challenging task in data science. Probabilistic graph approximation with simple topologies has practically been resorted to; typically the…
A treedepth decomposition of an undirected graph $G$ is a rooted forest $F$ on the vertex set of $G$ such that every edge $uv\in E(G)$ is in ancestor-descendant relationship in $F$. Given a weight function $w\colon V(G)\rightarrow…
Compatibility of unrooted phylogenetic trees is a well studied problem in phylogenetics. It asks to determine whether for a set of k input trees there exists a larger tree (called a supertree) that contains the topologies of all k input…
Given a directed graph $G=(V,A)$, the Directed Maximum Leaf Spanning Tree problem asks to compute a directed spanning tree (i.e., an out-branching) with as many leaves as possible. By designing a Branch-and-Reduced algorithm combined with…
We study the problem of maximizing the number of spanning trees in a connected graph by adding at most $k$ edges from a given candidate edge set. We give both algorithmic and hardness results for this problem: - We give a greedy algorithm…
The hop-constrained Steiner tree problem (HSTP) is a generalization of the classical Steiner tree problem. It asks for a minimum cost subtree that spans some specified nodes of a given graph, such that the number of edges between each node…
Constructing the maximum spanning tree $T$ of an edge-weighted connected graph $G$ is one of the important research topics in computer science and optimization, and the related research results have played an active role in practical…
In the Maximum-size Properly Colored Forest problem, we are given an edge-colored undirected graph and the goal is to find a properly colored forest with as many edges as possible. We study this problem within a broader framework by…
The Maximum Balanced Biclique Problem (MBBP) is a prominent model with numerous applications. Yet, the problem is NP-hard and thus computationally challenging. We propose novel ideas for designing effective exact algorithms for MBBP.…
Let $R$ and $B$ be two disjoint sets of points in the plane where the points of $R$ are colored red and the points of $B$ are colored blue, and let $n=|R\cup B|$. A bichromatic spanning tree is a spanning tree in the complete bipartite…
We consider several problems related to packing forests in graphs. The first one is to find $k$ edge-disjoint forests in a directed graph $G$ of maximal size such that the indegree of each vertex in these forests is at most $k$. We describe…