Related papers: Outlier Detection for DNA Fragment Assembly
Distortion of the underlying speech is a common problem for single-channel speech enhancement algorithms, and hinders such methods from being used more extensively. A dictionary based speech enhancement method that emphasizes preserving the…
In this paper, we design new sublinear-time algorithms for solving the gap edit distance problem and for embedding edit distance to Hamming distance. For the gap edit distance problem, we give an $\tilde{O}(\frac{n}{k}+k^2)$-time greedy…
Constrained clustering problems generalize classical clustering formulations, e.g., $k$-median, $k$-means, by imposing additional constraints on the feasibility of clustering. There has been significant recent progress in obtaining…
We develop machinery to design efficiently computable and consistent estimators, achieving estimation error approaching zero as the number of observations grows, when facing an oblivious adversary that may corrupt responses in all but an…
The combination of the Internet of Things and the Edge Computing gives many opportunities to support innovative applications close to end users. Numerous devices present in both infrastructures can collect data upon which various processing…
We hypothesize that similar objects should have similar outlier scores. To our knowledge, all existing outlier detectors calculate the outlier score for each object independently regardless of the outlier scores of the other objects.…
We study the design of embeddings into Euclidean space with outliers. Given a metric space $(X,d)$ and an integer $k$, the goal is to embed all but $k$ points in $X$ (called the ``outliers") into $\ell_2$ with the smallest possible…
Sparse estimation methods capable of tolerating outliers have been broadly investigated in the last decade. We contribute to this research considering high-dimensional regression problems contaminated by multiple mean-shift outliers which…
We hereby present a solution to a semantic textual similarity (STS) problem in which it is necessary to match two sentences containing, as the only distinguishing factor, highly specific information (such as names, addresses, identification…
We study the problem of minimum enclosing rectangle with outliers, which asks to find, for a given set of $n$ planar points, a rectangle with minimum area that encloses at least $(n-t)$ points. The uncovered points are regarded as outliers.…
The problem of approximate string matching is important in many different areas such as computational biology, text processing and pattern recognition. A great effort has been made to design efficient algorithms addressing several variants…
This study develops an algorithm to solve a variation of the Shortest Common Superstring (SCS) problem. There are two modifications to the base SCS problem. First, one string in the set S is allowed to have up to K mistakes, defined as not…
Given a pattern string $P$ of length $n$ and a query string $T$ of length $m$, where the characters of $P$ and $T$ are drawn from an alphabet of size $\Delta$, the {\em exact string matching} problem consists of finding all occurrences of…
In this paper we introduce and study the online consistent $k$-clustering with outliers problem, generalizing the non-outlier version of the problem studied in [Lattanzi-Vassilvitskii, ICML17]. We show that a simple local-search based…
We introduce an online outlier detection algorithm to detect outliers in a sequentially observed data stream. For this purpose, we use a two-stage filtering and hedging approach. In the first stage, we construct a multi-modal probability…
Given a set of strings over a specified alphabet, identifying a median or consensus string that minimizes the total distance to all input strings is a fundamental data aggregation problem. When the Hamming distance is considered as the…
In the Manhattan Sequence Consensus problem (MSC problem) we are given $k$ integer sequences, each of length $l$, and we are to find an integer sequence $x$ of length $l$ (called a consensus sequence), such that the maximum Manhattan…
Ensemble methods for classification and clustering have been effectively used for decades, while ensemble learning for outlier detection has only been studied recently. In this work, we design a new ensemble approach for outlier detection…
A pattern $\alpha$ is a string of variables and terminal letters. We say that $\alpha$ matches a word $w$, consisting only of terminal letters, if $w$ can be obtained by replacing the variables of $\alpha$ by terminal words. The matching…
An elastic-degenerate (ED) string $T$ is a sequence of $n$ sets $T[1],\ldots,T[n]$ containing $m$ strings in total whose cumulative length is $N$. We call $n$, $m$, and $N$ the length, the cardinality and the size of $T$, respectively. The…