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Experimental determination of protein function is resource-consuming. As an alternative, computational prediction of protein function has received attention. In this context, protein structural classification (PSC) can help, by allowing for…

Molecular Networks · Quantitative Biology 2020-03-17 Khalique Newaz , Mahboobeh Ghalehnovi , Arash Rahnama , Panos J. Antsaklis , Tijana Milenkovic

We investigate a network model based on an infinite regular square lattice embedded in the Euclidean plane where the node connection probability is given by the geometrical distance of nodes. We show that the degree distribution in the…

Physics and Society · Physics 2008-06-23 Matus Medo , Jan Smrek

This study introduces an algorithm that generates undirected graphs with three main characteristics of real-world networks: scale-freeness, short distances between nodes (small-world phenomenon), and large clustering coefficients. The main…

Social and Information Networks · Computer Science 2025-02-27 João Pedro C. Morais , Ruben Interian

Online social networks are a dominant medium in everyday life to stay in contact with friends and to share information. In Twitter, users can connect with other users by following them, who in turn can follow back. In recent years,…

Social and Information Networks · Computer Science 2022-05-06 Christoph Schweimer , Christine Gfrerer , Florian Lugstein , David Pape , Jan A. Velimsky , Robert Elsässer , Bernhard C. Geiger

The widespread relevance of increasingly complex networks requires methods to extract meaningful coarse-grained representations of such systems. For undirected graphs, standard community detection methods use criteria largely based on…

Physics and Society · Physics 2010-12-14 Kathryn Cooper , Mauricio Barahona

In a recent work [Proc. Natl. Acad. Sci. USA 108, 3838 (2011)], Schneider et al. proposed a new measure for network robustness and investigated optimal networks with respect to this quantity. For networks with a power-law degree…

Physics and Society · Physics 2011-08-10 Zhi-Xi Wu , Petter Holme

Networks may, or may not, be wired to have a core that is both itself densely connected and central in terms of graph distance. In this study we propose a coefficient to measure if the network has such a clear-cut core-periphery dichotomy.…

Physics and Society · Physics 2007-05-23 Petter Holme

The problem of node-similarity in networks has motivated a plethora of such measures between node-pairs, which make use of the underlying graph structure. However, higher-order relations cannot be losslessly captured by mere graphs and…

Social and Information Networks · Computer Science 2021-11-02 Govind Sharma , Paarth Gupta , M. Narasihma Murty

Network embedding, which aims to learn low-dimensional representations of nodes, has been used for various graph related tasks including visualization, link prediction and node classification. Most existing embedding methods rely solely on…

Social and Information Networks · Computer Science 2019-08-22 Palash Goyal , Homa Hosseinmardi , Emilio Ferrara , Aram Galstyan

Interactions and relations between objects may be pairwise or higher-order in nature, and so network-valued data are ubiquitous in the real world. The "space of networks", however, has a complex structure that cannot be adequately described…

Metric Geometry · Mathematics 2024-12-09 Stephen Y Zhang , Fangfei Lan , Youjia Zhou , Agnese Barbensi , Michael P H Stumpf , Bei Wang , Tom Needham

Users in Online Social Networks (OSN) leaves traces that reflect their personality characteristics. The study of these traces is important for a number of fields, such as a social science, psychology, OSN, marketing, and others. Despite a…

Social and Information Networks · Computer Science 2020-09-24 Dimitra Karanatsiou , Pavlos Sermpezis , Jon Gruda , Konstantinos Kafetsios , Ilias Dimitriadis , Athena Vakali

Random networks are increasingly used to analyse complex transportation networks, such as airline routes, roads and rail networks. So far, this research has been focused on describing the properties of the networks with the help of random…

Physics and Society · Physics 2017-09-19 Jürgen Hackl , Bryan T. Adey

The growing complexity of the power grid, driven by increasing share of distributed energy resources and by massive deployment of intelligent internet-connected devices, requires new modelling tools for planning and operation. Physics-based…

Machine Learning · Statistics 2018-11-26 Francesco Fusco

Many real world systems or web services can be represented as a network such as social networks and transportation networks. In the past decade, many algorithms have been developed to detect the communities in a network using connections…

Social and Information Networks · Computer Science 2015-01-21 Zhi Liu , Yan Huang

This paper surveys visualization and interaction techniques for geospatial networks from a total of 95 papers. Geospatial networks are graphs where nodes and links can be associated with geographic locations. Examples can include social…

Human-Computer Interaction · Computer Science 2021-04-21 Sarah Schöttler , Yalong Yang , Hanspeter Pfister , Benjamin Bach

In this paper we find an exact analytical expression for the number of spanning trees in Apollonian networks. This parameter can be related to significant topological and dynamic properties of the networks, including percolation, epidemic…

Combinatorics · Mathematics 2014-01-21 Zhongzhi Zhang , Bin Wu , Francesc Comellas

In an ego-network, an individual (ego) organizes its friends (alters) in different groups (social circles). This social network can be efficiently analyzed after learning representations of the ego and its alters in a low-dimensional, real…

Social and Information Networks · Computer Science 2020-02-18 Fatemeh Salehi Rizi , Michael Granitzer , Konstantin Ziegler

Real data collected from different applications that have additional topological structures and connection information are amenable to be represented as a weighted graph. Considering the node labeling problem, Graph Neural Networks (GNNs)…

Social and Information Networks · Computer Science 2020-02-06 Xiaoxiao Li , Joao Saude

We address the problem of social network de-anonymization when relationships between people are described by scale-free graphs. In particular, we propose a rigorous, asymptotic mathematical analysis of the network de-anonymization problem…

Social and Information Networks · Computer Science 2014-11-27 Carla Chiasserini , Michele Garetto , Emilio Leonardi

Exploring statistics of locally connected subgraph patterns (also known as network motifs) has helped researchers better understand the structure and function of biological and online social networks (OSNs). Nowadays the massive size of…

Social and Information Networks · Computer Science 2014-03-28 Pinghui Wang , John C. S. Lui , Bruno Ribeiro , Don Towsley , Junzhou Zhao , Xiaohong Guan
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