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Motivation: Surface generation and visualization are some of the most important tasks in biomolecular modeling and computation. Eulerian solvent excluded surface (ESES) software provides analytical solvent excluded surface (SES) in the…

Quantitative Methods · Quantitative Biology 2018-09-13 Rundong Zhao , Menglun Wang , Yiying Tong , Guo-Wei Wei

Feature screening is a powerful tool in the analysis of high dimensional data. When the sample size $N$ and the number of features $p$ are both large, the implementation of classic screening methods can be numerically challenging. In this…

Methodology · Statistics 2019-03-12 Xingxiang Li , Runze Li , Zhiming Xia , Chen Xu

A likelihood-based unfolding method based on Bayes' theorem is presented, with a particular emphasis on the application to differential cross-section measurements in high-energy particle interactions.

High Energy Physics - Experiment · Physics 2019-08-07 Riccardo Di Sipio

In high dimensional regression settings, sparsity enforcing penalties have proved useful to regularize the data-fitting term. A recently introduced technique called screening rules propose to ignore some variables in the optimization…

Machine Learning · Statistics 2017-12-29 Eugene Ndiaye , Olivier Fercoq , Alexandre Gramfort , Joseph Salmon

We develop a Bayesian variable selection method, called SVEN, based on a hierarchical Gaussian linear model with priors placed on the regression coefficients as well as on the model space. Sparsity is achieved by using degenerate spike…

Methodology · Statistics 2020-08-04 Dongjin Li , Somak Dutta , Vivekananda Roy

Simulation-based inference has been popular for amortized Bayesian computation. It is typical to have more than one posterior approximation, from different inference algorithms, different architectures, or simply the randomness of…

Methodology · Statistics 2024-03-04 Yuling Yao , Bruno Régaldo-Saint Blancard , Justin Domke

Monocular depth estimation (MDE) is a fundamental topic of geometric computer vision and a core technique for many downstream applications. Recently, several methods reframe the MDE as a classification-regression problem where a linear…

Computer Vision and Pattern Recognition · Computer Science 2023-09-26 Shuwei Shao , Zhongcai Pei , Xingming Wu , Zhong Liu , Weihai Chen , Zhengguo Li

Phase estimation protocols provide a fundamental benchmark for the field of quantum metrology. The latter represents one of the most relevant applications of quantum theory, potentially enabling the capability of measuring unknown physical…

In this paper an efficient and reliable method for stochastic yield estimation is presented. Since one main challenge of uncertainty quantification is the computational feasibility, we propose a hybrid approach where most of the Monte Carlo…

Computational Engineering, Finance, and Science · Computer Science 2020-10-12 Mona Fuhrländer , Sebastian Schöps

Nonparametric and machine learning methods are flexible methods for obtaining accurate predictions. Nowadays, data sets with a large number of predictors and complex structures are fairly common. In the presence of item nonresponse,…

Methodology · Statistics 2022-08-23 Mehdi Dagdoug , Camelia Goga , David Haziza

This paper considers homography estimation in a Bayesian filtering framework using rate gyro and camera measurements. The use of rate gyro measurements facilitates a more reliable estimate of homography in the presence of occlusions, while…

Robotics · Computer Science 2023-10-17 Arturo Del Castillo Bernal , Philippe Decoste , James Richard Forbes

We propose an iterative variable selection scheme for high-dimensional data with binary outcomes. The scheme adopts a structured screen-and-select framework and uses non-local prior-based Bayesian model selection within the same. The…

Methodology · Statistics 2022-11-08 Nilotpal Sanyal

Computer Vision practitioners must thoroughly understand their model's performance, but conditional evaluation is complex and error-prone. In biometric verification, model performance over continuous covariates---real-number attributes of…

Machine Learning · Computer Science 2020-09-22 Mel McCurrie , Hamish Nicholson , Walter J. Scheirer , Samuel Anthony

This contribution investigates the connection between isogeometric analysis and integral equation methods for full-wave electromagnetic problems up to the low-frequency limit. The proposed spline-based integral equation method allows for an…

Computational Engineering, Finance, and Science · Computer Science 2026-05-19 Maximilian Nolte , Riccardo Torchio , Sebastian Schöps , Jürgen Dölz , Felix Wolf , Albert E. Ruehli

We present a method for identification of models with good predictive performances in the family of Bayesian log-linear mixed models with Dirichlet process random effects. Such a problem arises in many different applications; here we…

Methodology · Statistics 2018-01-17 Cinzia Carota , Maurizio Filippone , Silvia Polettini

Two popular variable screening methods under the ultra-high dimensional setting with the desirable sure screening property are the sure independence screening (SIS) and the forward regression (FR). Both are classical variable screening…

Methodology · Statistics 2015-11-05 Ming-Yen Cheng , Sanying Feng , Gaorong Li , Heng Lian

This paper treats the problem of screening for variables with high correlations in high dimensional data in which there can be many fewer samples than variables. We focus on threshold-based correlation screening methods for three related…

Machine Learning · Statistics 2015-03-18 Alfred O. Hero , Bala Rajaratnam

A novel and highly efficient computational framework for reconstructing binary-type images suitable for models of various complexity seen in diverse biomedical applications is developed and validated. Efficiency in computational speed and…

Optimization and Control · Mathematics 2024-02-09 Paul R. Arbic , Vladislav Bukshtynov

In recent years we have been able to gather large amounts of genomic data at a fast rate, creating situations where the number of variables greatly exceeds the number of observations. In these situations, most models that can handle a…

Methodology · Statistics 2025-02-07 Andrea Bratsberg , Abhik Ghosh , Magne Thoresen

Support vector machine (SVM) is a well-known statistical technique for classification problems in machine learning and other fields. An important question for SVM is the selection of covariates (or features) for the model. Many studies have…

Methodology · Statistics 2022-02-22 Jiahui Zou , Chaoxia Yuan , Xinyu Zhang , Guohua Zou , Alan T. K. Wan