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The formation and dissociation of specific noncovalent interactions between a variety of macromolecules play a crucial role in the function of biological systems. During the last few years, three main lines of research led to a dramatic…

Biological Physics · Physics 2009-11-13 Pierre Bongrand

The standard genetic code is known to be much more efficient in minimizing adverse effects of misreading errors and one-point mutations in comparison with a random code having the same structure, i.e. the same number of codons coding for…

Quantitative Methods · Quantitative Biology 2012-10-17 V. R. Chechetkin , V. V. Lobzin

Optically active spin defects in solids are promising platforms for quantum technologies. Here, we present a first-principles framework to investigate intersystem crossing processes, which represent crucial steps in the optical…

Accurate interaction potentials between microscopic components such as colloidal particles or cells are crucial to understanding a range of processes, including colloidal crystallization, bacterial colony formation, and cancer metastasis.…

The building of minimal self-reproducing systems with a physical embodiment (generically called protocells) is a great challenge, with implications for both theory and applied sciences. Although the classical view of a living protocell…

Cell Behavior · Quantitative Biology 2009-09-29 Harold Fellermann , Ricard V. Solé

Classical theory of crystals states that a medium to be considered homogeneous must satisfy the following requirements: a) the dimension of the elementary cell must be much smaller than the incident wavelength; b) the sample must contain a…

The intricate network of interactions observed in RNA three-dimensional structures is often described in terms of a multitude of geometrical properties, including helical parameters, base pairing/stacking, hydrogen bonding and backbone…

Biomolecules · Quantitative Biology 2015-09-01 Sandro Bottaro , Francesco Di Palma , Giovanni Bussi

The distance-resolved effective interaction potential between two parallel DNA molecules is calculated by computer simulations with explicit tetravalent counterions and monovalent salt. Adding counterions first yields an attractive minimum…

Soft Condensed Matter · Physics 2009-11-10 E. Allahyarov , H. Löwen , G. Gompper

We present a mechanism of resistivity minimum in conduction electron systems coupled with localized moments, which is distinguished from the Kondo effect. Instead of the spin-flip process in the Kondo effect, electrons are elastically…

Strongly Correlated Electrons · Physics 2015-06-03 Masafumi Udagawa , Hiroaki Ishizuka , Yukitoshi Motome

A minimax converse for the identification via channels is derived. By this converse, a general formula for the identification capacity, which coincides with the transmission capacity, is proved without the assumption of the strong converse…

Information Theory · Computer Science 2021-01-15 Shun Watanabe

Cell-cell communication is often achieved by secreted signaling molecules that bind membrane-bound receptors. A common class of such receptors are G-protein coupled receptors, where extracellular binding induces changes on the membrane…

Subcellular Processes · Quantitative Biology 2020-03-04 Steven Blaber , David A. Sivak

The optical properties of a small magnetic cluster are studied in a magnetic version of Frank-Condon principle. This simple model is considered to show new basic physics and could be adopted to treat real problems. The energies and…

Strongly Correlated Electrons · Physics 2009-11-11 Mahrous R. Ahmed , G. A. Gehring

The assumption that a small point-like configuration does not interact with nucleons leads to a new set of sum rules that are interpreted as models of the baryon-nucleon interaction. These models are rendered semi-realistic by requiring…

Nuclear Theory · Physics 2008-11-26 L. Frankfurt , W. R. Greenberg , G. A. Miller , M. Strikman

The form of the kernel that controls the dynamics of the Bethe-Salpeter equations is essential for obtaining quantitatively accurate predictions for the observable properties of hadrons. In the present work we briefly review the basic…

High Energy Physics - Phenomenology · Physics 2016-04-20 J. Papavassiliou

Quantun spin transport through a short DNA chain connected to ferromagnetic electrodes has been investigated by the transfer matrix method. We describe the system by a tight-binding model where the parameters are extracted from the…

Soft Condensed Matter · Physics 2009-11-11 X. F. Wang , Tapash Chakraborty

Understanding how interparticle interactions govern phase behavior is central to controlling self-organization in multicomponent soft-matter systems. In particular, the role of cross-interactions between unlike components remains…

Soft Condensed Matter · Physics 2026-03-03 Umesh Dhumal

Giving three examples, the form factors of the nucleon, the polarisability of the charged pion and the interference of the $S_{11}(1535)$ with the $D_{13}(1520)$ excitation of the nucleon in the $\eta p$-decay channel, it is argued that the…

High Energy Physics - Phenomenology · Physics 2008-11-26 Thomas Walcher

We consider a one-dimensional classical many-body system with interaction potential of Lennard-Jones type in the thermodynamic limit at low temperature $1/\beta\in(0,\infty)$. The ground state is a periodic lattice. We show that when the…

Mathematical Physics · Physics 2021-11-24 Sabine Jansen , Wolfgang König , Bernd Schmidt , Florian Theil

The interaction between nano- or micro-sized particles and cell membranes is of crucial importance in many biological and biomedical applications such as drug and gene delivery to cells and tissues. During their cellular uptake, the…

Motivated by the set-antiset method for codes over permutations under the infinity norm, we study anticodes under this metric. For half of the parameter range we classify all the optimal anticodes, which is equivalent to finding the maximum…

Information Theory · Computer Science 2010-07-27 Itzhak Tamo , Moshe Schwartz