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Random geometric graphs (RGG) can be formalized as hidden-variables models where the hidden variables are the coordinates of the nodes. Here we develop a general approach to extract the typical configurations of a generic hidden-variables…

Disordered Systems and Neural Networks · Physics 2015-04-28 Massimo Ostilli , Ginestra Bianconi

Maximal ancestral graphs (MAGs) have many desirable properties; in particular they can fully describe conditional independences from directed acyclic graphs (DAGs) in the presence of latent and selection variables. However, different MAGs…

Combinatorics · Mathematics 2020-07-07 Zhongyi Hu , Robin Evans

Due to its human-interpretability and invariance properties, Directed Acyclic Graph (DAG) has been a foundational tool across various areas of AI research, leading to significant advancements. However, DAG learning remains highly…

Machine Learning · Computer Science 2025-06-24 Naiyu Yin , Tian Gao , Yue Yu

In this paper, our goal is to characterize two graph classes based on the properties of minimal vertex (edge) separators. We first present a structural characterization of graphs in which every minimal vertex separator is a stable set. We…

Discrete Mathematics · Computer Science 2011-03-16 Mrinal Kumar , Gaurav Maheswari , N. Sadagopan

Graphical Markov models combine conditional independence constraints with graphical representations of stepwise data generating processes.The models started to be formulated about 40 years ago and vigorous development is ongoing.…

Methodology · Statistics 2015-10-12 Nanny Wermuth

Estimating the structure of directed acyclic graphs (DAGs) from observational data remains a significant challenge in machine learning. Most research in this area concentrates on learning a single DAG for the entire population. This paper…

Machine Learning · Statistics 2024-02-21 Ryan Thompson , Edwin V. Bonilla , Robert Kohn

Acyclic digraphs are the underlying representation of Bayesian networks, a widely used class of probabilistic graphical models. Learning the underlying graph from data is a way of gaining insights about the structural properties of a…

Machine Learning · Statistics 2022-05-06 Jack Kuipers , Giusi Moffa

DAG models are statistical models satisfying a collection of conditional independence relations encoded by the nonedges of a directed acyclic graph (DAG) $\mathcal{G}$. Such models are used to model complex cause-effect systems across a…

Combinatorics · Mathematics 2017-06-21 Adityanarayanan Radhakrishnan , Liam Solus , Caroline Uhler

An algorithm for generating the structure of a directed acyclic graph from data using the notion of causal input lists is presented. The algorithm manipulates the ordering of the variables with operations which very much resemble arc…

Artificial Intelligence · Computer Science 2013-03-25 Remco R. Bouckaert

We develop terminology and methods for working with maximally oriented partially directed acyclic graphs (maximal PDAGs). Maximal PDAGs arise from imposing restrictions on a Markov equivalence class of directed acyclic graphs, or…

Statistics Theory · Mathematics 2018-06-20 Emilija Perković , Markus Kalisch , Maloes H. Maathuis

Random graph generation is an important tool for studying large complex networks. Despite abundance of random graph models, constructing models with application-driven constraints is poorly understood. In order to advance state-of-the-art…

Data Structures and Algorithms · Computer Science 2018-01-01 Mohsen Bayati , Andrea Montanari , Amin Saberi

This paper considers inference of causal structure in a class of graphical models called "conditional DAGs". These are directed acyclic graph (DAG) models with two kinds of variables, primary and secondary. The secondary variables are used…

Methodology · Statistics 2014-11-12 Chris J. Oates , Jim Q. Smith , Sach Mukherjee

We investigate probabilistic graphical models that allow for both cycles and latent variables. For this we introduce directed graphs with hyperedges (HEDGes), generalizing and combining both marginalized directed acyclic graphs (mDAGs) that…

Statistics Theory · Mathematics 2017-10-25 Patrick Forré , Joris M. Mooij

While visual comparison of directed acyclic graphs (DAGs) is commonly encountered in various disciplines (e.g., finance, biology), knowledge about humans' perception of graph similarity is currently quite limited. By graph similarity…

Human-Computer Interaction · Computer Science 2017-09-07 Kathrin Ballweg , Margit Pohl , Günter Wallner , Tatiana von Landesberger

In mixed graphs, there are both directed and undirected edges. An extension of acyclicity to this mixed-graph setting is known as maximally ancestral graphs. This extension is of considerable interest in causal learning in the presence of…

Machine Learning · Computer Science 2025-05-23 Petr Ryšavý , Pavel Rytíř , Xiaoyu He , Georgios Korpas , Jakub Mareček

We define a statistical ensemble of non-degenerate graphs, i.e. graphs without multiple- and self-connections between nodes. The node degree distribution is arbitrary, but the nodes are assumed to be uncorrelated. This completes our earlier…

Statistical Mechanics · Physics 2009-11-07 Z. Burda , A. Krzywicki

Covariate adjustment is a widely used approach to estimate total causal effects from observational data. Several graphical criteria have been developed in recent years to identify valid covariates for adjustment from graphical causal…

Statistics Theory · Mathematics 2015-07-07 Emilija Perković , Johannes Textor , Markus Kalisch , Marloes H. Maathuis

We introduce binomial edge ideals attached to a simple graph $G$ and study their algebraic properties. We characterize those graphs for which the quadratic generators form a Gr\"obner basis in a lexicographic order induced by a vertex…

Commutative Algebra · Mathematics 2009-10-16 Juergen Herzog , Takayuki Hibi , Freyja Hreinsdottir , Thomas Kahle , Johannes Rauh

We describe computationally efficient methods for learning mixtures in which each component is a directed acyclic graphical model (mixtures of DAGs or MDAGs). We argue that simple search-and-score algorithms are infeasible for a variety of…

Machine Learning · Computer Science 2015-05-19 Bo Thiesson , Christopher Meek , David Maxwell Chickering , David Heckerman

We introduce a new random graph model motivated by biological questions relating to speciation. This random graph is defined as the stationary distribution of a Markov chain on the space of graphs on $\{1, \ldots, n\}$. The dynamics of this…

Probability · Mathematics 2019-06-24 François Bienvenu , Florence Débarre , Amaury Lambert
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