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In this article, we propose a numerical method to solve semi-discrete optimal transport problems for gigantic pointsets (108 points and more). By pushing the limits by several orders of magnitude, it opens the path to new applications in…

Computational Physics · Physics 2025-09-16 Bruno Lévy , Nicolas Ray , Quentin Mérigot , Hugo Leclerc

We study here, from first principles, what properties of voids are to be expected in a fractal point distribution and how the void distribution is related to its morphology. We show this relation in various examples and apply our results to…

Astrophysics · Physics 2008-11-26 Jose Gaite , Susanna C. Manrubia

Disordered hyperuniform many-particle systems are recently discovered exotic states of matter, characterized by a complete suppression of normalized infinite-wavelength density fluctuations and lack of conventional long-range order. Here,…

Statistical Mechanics · Physics 2024-11-12 Eli Newby , Wenlong Shi , Yang Jiao , Reka Albert , Salvatore Torquato

A recent burst of dynamic single-cell growth-division data makes it possible to characterize the stochastic dynamics of cell division control in bacteria. Different modeling frameworks were used to infer specific mechanisms from such data,…

Cell Behavior · Quantitative Biology 2017-03-22 Jacopo Grilli , Matteo Osella , Andrew S. Kennard , Marco Cosentino Lagomarsino

The Voronoi Entropy (VE) and the continuous measure of symmetry (CSM) characterize the orderliness of a set of points on a 2D plane. The Voronoi entropy is the Shannon entropy of the Voronoi tessellation of the plane into polygons,…

Statistical Mechanics · Physics 2024-10-30 Edward Bormashenko , Shraga Shoval , Mark Frenkel , Michael Nosonovsky

Consider the problem of partitioning an arbitrary metric space into pieces of diameter at most \Delta, such every pair of points is separated with relatively low probability. We propose a rate-based algorithm inspired by…

Data Structures and Algorithms · Computer Science 2013-07-23 Anupam Gupta , Kunal Talwar

Motivated by experiments on cell segregation, we present a two-species model of interacting particles, aiming at a quantitative description of this phenomenon. Under precise scaling hypothesis, we derive from the microscopic model a…

Analysis of PDEs · Mathematics 2019-06-04 J. Barré , P. Degond , D. Peurichard , E. Zatorska

Phase transformations ruled by non-simultaneous nucleation and growth do not lead to random distribution of nuclei. Since nucleation is only allowed in the untransformed portion of space, positions of nuclei are correlated. In this article…

Chemical Physics · Physics 2018-02-14 Massimo Tomellini

In this work we approach cell migration under a large-scale assumption, so that the system reduces to a particle in motion. Unlike classical particle models, the cell displacement results from its internal activity: the cell velocity is a…

Cell Behavior · Quantitative Biology 2018-08-02 Christèle Etchegaray , Nicolas Meunier

Mobile network operator (MNO) data are a rich data source for official statistics, such as present population, mobility, migration, and tourism. Estimating the geographic location of mobile devices is an essential step for statistical…

Signal Processing · Electrical Eng. & Systems 2021-10-04 Martijn Tennekes , Yvonne A. P. M. Gootzen

We have developed a novel method of determining 2D radial density profiles for astronomical systems of discrete objects using Voronoi tessellations. This Voronoi-based method was tested against the standard annulus-based method on 5…

Instrumentation and Methods for Astrophysics · Physics 2024-07-04 Veronika Dornan , William E. Harris

We introduce the concept of a hyperuniformity disorder length that controls the variance of volume fraction fluctuations for randomly placed windows of fixed size. In particular, fluctuations are determined by the average number of…

Soft Condensed Matter · Physics 2017-09-18 A. T. Chieco , R. Dreyfus , D. J. Durian

This article provides numerical evidence that under volume constraint the ball is the set which maximizes the perimeter of the least-perimeter partition into cells with prescribed areas. We introduce a numerical maximization algorithm which…

Optimization and Control · Mathematics 2021-06-08 Beniamin Bogosel , Edouard Oudet

We analyze pattern formation on a network of cells where each cell inhibits its neighbors through cell-to-cell contact signaling. The network is modeled as an interconnection of identical dynamical subsystems each of which represents the…

Dynamical Systems · Mathematics 2014-07-25 Ana S. Rufino Ferreira , Murat Arcak

We consider diffusion limited aggregation of particles of two different kinds. It is assumed that a particle of one kind may adhere only to another particle of the same kind. The particles aggregate on a linear substrate which consists of…

Other Condensed Matter · Physics 2015-05-20 E. B. Postnikov , A. B. Ryabov , A. Loskutov

In many biological processes heterogeneity within cell populations is an important issue. In this work we consider populations where the behavior of every single cell can be described by a system of ordinary differential equations.…

Molecular Networks · Quantitative Biology 2010-02-25 J. Hasenauer , S. Waldherr , M. Doszczak , P. Scheurich , F. Allgower

The goal of this paper is to quantitatively describe some statistical properties of higher-dimensional determinantal point processes with a primary focus on the nearest-neighbor distribution functions. Toward this end, we express these…

Statistical Mechanics · Physics 2009-11-13 A. Scardicchio , C. E. Zachary , S. Torquato

Markovian population models are suitable abstractions to describe well-mixed interacting particle systems in situation where stochastic fluctuations are significant due to the involvement of low copy particles. In molecular biology,…

Quantitative Methods · Quantitative Biology 2014-01-17 Christoph Zechner , Federico Wadehn , Heinz Koeppl

The dynamics of city's spatial structures are determined by the coupling of functional components (such as restaurants and shops) and human beings within the city. Yet, there still lacks mechanism models to quantify the spatial distribution…

Segregation patterns of size-bidisperse particle mixtures in a fully-three-dimensional flow produced by alternately rotating a spherical tumbler about two perpendicular axes are studied over a range of particle sizes and volume ratios using…

Soft Condensed Matter · Physics 2019-07-03 Mengqi Yu , Paul B. Umbanhowar , Julio M. Ottino , Richard M. Lueptow
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