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A common feature of biological networks is the geometric property of self-similarity. Molecular regulatory networks through to circulatory systems, nervous systems, social systems and ecological trophic networks, show self-similar…

Molecular Networks · Quantitative Biology 2012-03-09 Simon DeDeo , David C. Krakauer

Adaptive dynamical networks appear in various real-word systems. One of the simplest phenomenological models for investigating basic properties of adaptive networks is the system of coupled phase oscillators with adaptive couplings. In this…

Adaptation and Self-Organizing Systems · Physics 2019-11-11 Rico Berner , Jan Fialkowski , Dmitry Kasatkin , Vladimir Nekorkin , Serhiy Yanchuk , Eckehard Schöll

Complex dynamical systems are often modeled as networks, with nodes representing dynamical units which interact through the network's links. Gene regulatory networks, responsible for the production of proteins inside a cell, are an example…

Statistical Mechanics · Physics 2009-09-30 Zoran Levnajić

In evolving complex systems such as air traffic and social organizations, collective effects emerge from their many components' dynamic interactions. While the dynamic interactions can be represented by temporal networks with nodes and…

Social and Information Networks · Computer Science 2017-09-21 Tiago P. Peixoto , Martin Rosvall

We search for conditions under which a characteristic time scale for ordering dynamics towards either of two absorbing states in a finite complex network of interactions does not exist. With this aim, we study random networks and networks…

Physics and Society · Physics 2009-11-13 R. Toivonen , X. Castelló , V. M. Eguíluz , J. Saramäki , K. Kaski , M. San Miguel

Generative mechanisms which lead to empirically observed structure of networked systems from diverse fields like biology, technology and social sciences form a very important part of study of complex networks. The structure of many…

Physics and Society · Physics 2015-12-03 Snehal M. Shekatkar , G. Ambika

To find interesting structure in networks, community detection algorithms have to take into account not only the network topology, but also dynamics of interactions between nodes. We investigate this claim using the paradigm of…

Social and Information Networks · Computer Science 2012-03-19 Rumi Ghosh , Kristina Lerman

Many real-world systems can be modeled as networks of interacting oscillatory units. Collective dynamics that are of functional relevance for the oscillator network, such as switching between metastable states, arise through the interplay…

Dynamical Systems · Mathematics 2019-08-05 Christian Bick

We show that a complex network of phase oscillators may display interfaces between domains (clusters) of synchronized oscillations. The emergence and dynamics of these interfaces are studied in the general framework of interacting phase…

Statistical Mechanics · Physics 2010-12-07 D. Li , I. Leyva , J. A. Almendral , I. Sendina-Nadal , J. M. Buldu , S. Havlin , S. Boccaletti

This paper investigates questions related to the modularity in discrete models of biological interaction networks. We develop a theoretical framework based on the analysis of their asymptotic dynamics. More precisely, we exhibit formal…

Discrete Mathematics · Computer Science 2012-01-16 Franck Delaplace , Hanna Klaudel , Tarek Melliti , Sylvain Sené

We propose a method to decompose dynamical systems based on the idea that modules constrain the spread of perturbations. We find partitions of system variables that maximize 'perturbation modularity', defined as the autocovariance of…

Physics and Society · Physics 2022-11-22 Artemy Kolchinsky , Alexander J. Gates , Luis M. Rocha

The analysis of complex and time-evolving interactions like social dynamics represents a current challenge for the science of complex systems. Temporal networks stand as a suitable tool to schematise such systems, encoding all the appearing…

The control of complex systems is an ongoing challenge of complexity research. Recent advances using concepts of structural control deduce a wide range of control related properties from the network representation of complex systems. Here,…

Statistical Mechanics · Physics 2013-12-31 Márton Pósfai , Philipp Hövel

Modular structure is ubiquitous among real-world networks from related proteins to social groups. Here we analyze the modular organization of brain networks at a large-scale (voxel level) extracted from functional magnetic resonance imaging…

Data Analysis, Statistics and Probability · Physics 2009-04-16 M. Valencia , M. A. Pastor , MA. Fernandez-Seara , J. Artieda , J. Martinerie , M. Chavez

Oscillator networks found in social and biological systems are characterized by the presence of wide ranges of coupling strengths and complex organization. Yet robustness and synchronization of oscillations are found to emerge on…

Physics and Society · Physics 2019-12-17 Daniel Monsivais , Kunal Bhattacharya , Rafael A. Barrio , Philip K. Maini , Kimmo K. Kaski

Hierarchically modular organization is a canonical network topology that is evolutionarily conserved in the nervous systems of animals. Within the network, neurons form directional connections defined by the growth of their axonal…

Neurons and Cognition · Quantitative Biology 2024-04-26 Nobuaki Monma , Hideaki Yamamoto , Naoya Fujiwara , Hakuba Murota , Satoshi Moriya , Ayumi Hirano-Iwata , Shigeo Sato

In a complex system, the individual components are neither so tightly coupled or correlated that they can all be treated as a single unit, nor so uncorrelated that they can be approximated as independent entities. Instead, patterns of…

Populations and Evolution · Quantitative Biology 2015-09-15 Blake C. Stacey

Uncovering structural properties of ecological networks is a crucial starting point of studying the system's stability in response to various types of perturbations. We analyze pollination and seed disposal networks, which are…

Physics and Society · Physics 2021-11-16 Sang Hoon Lee

Modularity structures are common in various social and biological networks. However, its dynamical origin remains an open question. In this work, we set up a dynamical model describing the evolution of a social network. Based on the…

Physics and Society · Physics 2011-08-19 Menghui Li , Shuguang Guan , Choy-Heng Lai

Higher-order networks, naturally described as hypergraphs, are essential for modeling real-world systems involving interactions among three or more entities. Stochastic block models offer a principled framework for characterizing mesoscale…

Social and Information Networks · Computer Science 2025-11-27 Kazuki Nakajima , Yuya Sasaki , Takeaki Uno , Masaki Aida