Related papers: Pattern Avoidance in Ternary Trees

We consider the counting problem of the number of \textit{leaf-labeled increasing trees}, where internal nodes may have an arbitrary number of descendants. The set of all such trees is a discrete representation of the genealogies obtained…

We look at a family of meta-Fibonacci sequences which arise in studying the number of leaves at the largest level in certain infinite sequences of binary trees, restricted compositions of an integer, and binary compact codes. For this…

The sequence A120986 in the Encyclopedia of Integer Sequences counts ternary trees according to the number of nodes and the number of middle edges. Using a certain substition, the underlying cubic equation can be factored. This leads to an…

Phylogenetic networks are an extension of phylogenetic trees that allow for the representation of reticulate evolution events. One of the classes of networks that has gained the attention of the scientific community over the last years is…

We give a new algorithm to construct optimal alphabetic ternary trees, where every internal node has at most three children. This algorithm generalizes the classic Hu-Tucker algorithm, though the overall computational complexity has yet to…

Rooted phylogenetic networks allow biologists to represent evolutionary relationships between present-day species by revealing ancestral speciation and hybridization events. A convenient and well-studied class of such networks are…

We discuss a notion of convergence for binary trees that is based on subtree sizes. In analogy to recent developments in the theory of graphs, posets and permutations we investigate some general aspects of the topology, such as a…

The use of machine learning algorithms in finance, medicine, and criminal justice can deeply impact human lives. As a consequence, research into interpretable machine learning has rapidly grown in an attempt to better control and fix…

Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…

Following Anders and Archer, we say that an unordered rooted labeled forest avoids the pattern $\sigma\in\mathcal{S}_k$ if in each tree, each sequence of labels along the shortest path from the root to a vertex does not contain a…

Trees are useful entities allowing to model data structures and hierarchical relationships in networked decision systems ubiquitously. An ordered tree is a rooted tree where the order of the subtrees (children) of a node is significant. In…

Higher dimensional permutations are tuples of d-1 permutations that can be identified with a point set in a d-dimensional grid. In N. Bonichon and P.-J. Morel, {\it J. Integer Sequences} 25 (2022), several conjectures regarding the…

We study an abstract notion of tree structure which lies at the common core of various tree-like discrete structures commonly used in combinatorics: trees in graphs, order trees, nested subsets of a set, tree-decompositions of graphs and…

Rooted phylogenetic networks are often constructed by combining trees, clusters, triplets or characters into a single network that in some well-defined sense simultaneously represents them all. We review these four models and investigate…

In this paper, we enumerate two families of pattern-avoiding permutations: those avoiding the vincular pattern $2-41-3$, which we call semi-Baxter permutations, and those avoiding the vincular patterns $2-41-3$, $3-14-2$ and $3-41-2$, which…

Tree-like tableaux are objects in bijection with alternative or permutation tableaux. They have been the subject of a fruitful combinatorial study for the past few years. In the present work, we define and study a new subclass of tree-like…

This paper introduces a new combinatorial framework for modeling the growth of binary trees through a discrete evolution process that incorporates a growing rule and an extinction rule. Building upon the theory of increasingly labeled…

The purpose of this paper is twofold. First we answer to a question asked by Steingrimsson and Williams about certain permutation tableaux: we construct a bijection between binary trees and the so-called Catalan tableaux. These tableaux are…

Maxmin trees are labeled trees with the property that each vertex is either a local maximum or a local minimum. Such trees were originally introduced by Postnikov, who gave a formula to count them and different combinatorial interpretations…

Pattern avoidance classes of permutations that cannot be expressed as unions of proper subclasses can be described as the set of subpermutations of a single bijection. In the case that this bijection is a permutation of the natural numbers…