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The extraction of information form high-throughput experiments is a key aspect of modern biology. Early in the development of microarray technology, researchers recognized that the size of the datasets and the limitations of both…

Genomics · Quantitative Biology 2007-05-23 Willy Valdivia-Granda , Christopher Dwan

Efficient querying and analysis of large tabular datasets remain significant challenges, especially for users without expertise in programming languages like SQL. Text-to-SQL approaches have shown promising performance on benchmark data;…

Databases · Computer Science 2025-08-27 Yipeng Zhang , Chen Wang , Yuzhe Zhang , Jacky Jiang

In this paper we describe our efforts to bring scientific data into the digital library. This has required extension of the standard WWW, and also the extension of metadata standards far beyond the Dublin Core. Our system demonstrates this…

Digital Libraries · Computer Science 2007-05-23 Robert E. McGrath , Joe Futrelle , Ray Plante , Damien Guillaume

As the amount of scientific data continues to grow at ever faster rates, the research community is increasingly in need of flexible computational infrastructure that can support the entirety of the data science lifecycle, including…

Computers and Society · Computer Science 2016-04-12 Robert L. Grossman , Allison Heath , Mark Murphy , Maria Patterson , Walt Wells

A large scientific community depends on the precise modelling of complex processes in particle cascades in various types of matter. These models are used most prevalently in cosmic-ray physics, astrophysical-neutrino physics, and gamma-ray…

Instrumentation and Methods for Astrophysics · Physics 2018-12-20 Ralph Engel , Dieter Heck , Tim Huege , Tanguy Pierog , Maximilian Reininghaus , Felix Riehn , Ralf Ulrich , Michael Unger , Darko Veberič

Text-to-SQL datasets are essential for training and evaluating text-to-SQL models, but existing datasets often suffer from limited coverage and fail to capture the diversity of real-world applications. To address this, we propose a novel…

Computation and Language · Computer Science 2025-11-25 Hao Wang , Yuanfeng Song , Xiaoming Yin , Xing Chen

While automated experiments and high-throughput methods are becoming more mainstream in the age of data, empowering individual researchers to capture, collate, and contextualize their data faster and more reproducibly still remains a…

Computers and Society · Computer Science 2020-07-30 Ha-Kyung Kwon , Chirranjeevi Balaji Gopal , Jared Kirschner , Santiago Caicedo , Brian D. Storey

This paper is an extended version of a report from a student-developed study to compare Microsoft SQL Server and PostgreSQL, two widely-used enterprise-class relational database management systems (RDBMSs). The study followed an…

Databases · Computer Science 2017-10-24 Andrew Figueroa , Steven Rollo , Sean Murthy

In the current data-driven science era, it is needed that data analysis techniques has to quickly evolve to face with data whose dimensions has increased up to the Petabyte scale. In particular, being modern astrophysics based on…

Instrumentation and Methods for Astrophysics · Physics 2017-06-14 Giuseppe Riccio , Massimo Brescia , Stefano Cavuoti , Amata Mercurio , Anna Maria Di Giorgio , Sergio Molinari

Research in data warehousing and OLAP has produced important technologies for the design, management and use of information systems for decision support. With the development of Internet, the availability of various types of data has…

The popularity of data science as a discipline and its importance in the emerging economy and industrial progress dictate that machine learning be democratized for the masses. This also means that the current practice of workforce training…

Machine Learning · Computer Science 2024-05-28 Hasan M Jamil

Context-aware database has drawn increasing attention from both industry and academia recently by taking users' current situation and environment into consideration. However, most of the literature focus on individual context, overlooking…

Databases · Computer Science 2014-04-15 Xiaolu Lu , Dongxu Li , Xiang Li , Ling Feng

Performing data-intensive analytics is an essential part of modern Earth science. As such, research in atmospheric physics and meteorology frequently requires the processing of very large observational and/or modeled datasets. Typically,…

Databases · Computer Science 2021-09-17 Justus Henneberg , Felix Schuhknecht , Philipp Reutter , Nils Brast , Peter Spichtinger

With the increasing amount of data available to scientists in disciplines as diverse as bioinformatics, physics, and remote sensing, scientific workflow systems are becoming increasingly important for composing and executing scalable data…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-20 Jonathan Bader , Nils Diedrich , Lauritz Thamsen , Odej Kao

Microsoft Azure is dedicated to guarantee high quality of service to its customers, in particular, during periods of high customer activity, while controlling cost. We employ a Data Science (DS) driven solution to predict user load and…

Increasingly large data series collections are becoming commonplace across many different domains and applications. A key operation in the analysis of data series collections is similarity search, which has attracted lots of attention and…

Databases · Computer Science 2020-06-23 Karima Echihabi , Kostas Zoumpatianos , Themis Palpanas , Houda Benbrahim

Objective: To (1) demonstrate the implementation of a data science platform built on open-source technology within a large, academic healthcare system and (2) describe two computational healthcare applications built on such a platform.…

With the ever-growing availability of so-called complex data, especially on the Web, decision-support systems such as data warehouses must store and process data that are not only numerical or symbolic. Warehousing and analyzing such data…

Databases · Computer Science 2008-09-12 Jean-Christian Ralaivao , Jérôme Darmont

Apache Spark is a Big Data framework for working on large distributed datasets. Although widely used in the industry, it remains rather limited in the academic community or often restricted to software engineers. The goal of this paper is…

Instrumentation and Methods for Astrophysics · Physics 2019-07-17 S. Plaszczynski , J. Peloton , C. Arnault , J. E. Campagne

Spreadsheets offer a supremely successful and intuitive means of processing and exchanging numerical content. Its intuitive ad-hoc nature makes it hugely popular for use in diverse areas including business and engineering, yet these very…

Software Engineering · Computer Science 2024-02-06 Peter Bartholomew