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Cells of almost all solid tissues are connected with gap junctions which permit the direct transfer of ions and small molecules, integral to regulating coordinated function in the tissue. The pancreatic islets of Langerhans are responsible…

Biological Physics · Physics 2013-08-06 Pranay Goel , Anita Mehta

Understanding how deep learning models predict oncology patient risk can provide critical insights into disease progression, support clinical decision-making, and pave the way for trustworthy and data-driven precision medicine. Building on…

Computer Vision and Pattern Recognition · Computer Science 2024-11-13 Marvin Sextro , Gabriel Dernbach , Kai Standvoss , Simon Schallenberg , Frederick Klauschen , Klaus-Robert Müller , Maximilian Alber , Lukas Ruff

Phenotype variations define heterogeneity of biological and molecular systems, which play a crucial role in several mechanisms. Heterogeneity has been demonstrated in tumor cells. Here, samples from blood of patients affected from colon…

Biological Physics · Physics 2015-11-09 Giuseppina Simone

Highly malignant brain tumors such as Glioblastoma Multiforme (GBM) form complex growth patterns in vitro in which invasive cells organize in tenuous branches. Here, we formulate a chemotaxis model for this sort of growth. A key element…

Biological Physics · Physics 2009-11-07 Leonard M. Sander , Thomas S. Deisboeck

We discuss the effect of CP-violating $Zb\bar{b}$, $Zb\bar{b}G$ and $Zb\bar{b}\gamma$ couplings on the width $\Gamma(Z\rightarrow b\bar bX)$. The presence of such couplings leads in a natural way to an increase of this width relative to the…

High Energy Physics - Phenomenology · Physics 2010-11-01 W. Bernreuther , G. W. Botz , D. Bruss , P. Haberl , O. Nachtmann

Breakage-Fusion-Bridge (BFB) is a mechanism of genomic instability characterized by the joining and subsequent tearing apart of sister chromatids. When this process is repeated during multiple rounds of cell division, it leads to patterns…

Genomics · Quantitative Biology 2013-03-20 Shay Zakov , Marcus Kinsella , Vineet Bafna

The importance of some atom hydrogen collisions in AGN has been investigated. The results are useful for better estimate of the hydrogen Balmer lines uxes, which usage for effective temperature diagnostics in astrophysical plasma is limited…

Astrophysics of Galaxies · Physics 2020-01-15 M. S. Dimitrijevic , V. A. Sreckovic , Lj. M. Ignjatovic , B. P. Marinkovic

Cancer stem cells have been shown to be critical to the development of a variety of solid cancers. The precise interplay mechanisms between cancer stem cells and the rest of a tissue are still not elucidated. To shed light on the…

Cell Behavior · Quantitative Biology 2019-09-04 L. Benítez , L. Barberis , C. A. Condat

Tumor-associated macrophages are a key component that contributes to the immunosuppressive microenvironment in human cancers. However, therapeutic targeting of macrophages has been a challenge in clinic due to the limited understanding of…

The phenotypic plasticity of cancer cells has received special attention in recent years. Even though related models have been widely studied in terms of mathematical properties, a thorough statistical analysis on parameter estimation and…

Cell Behavior · Quantitative Biology 2017-12-05 Da Zhou , Shanjun Mao , Kaiyi Chen , Xiaofang Cao , Jie Hu

Due to over-metabolism, the tumour cells become hypoxic. To overcome this situation tumour cells secret several chemical substrates to attract nearby blood vessels towards it (angiogenesis). Transition from avascular to vascular tumour is…

Biological Physics · Physics 2019-09-06 Sounak Sadhukhan , S. K. Basu

Cancer progression is an example of a rapid adaptive process where evolving new traits is essential for survival and requires a high mutation rate. Precancerous cells acquire a few key mutations that drive rapid population growth and…

Populations and Evolution · Quantitative Biology 2015-06-18 Christopher McFarland , Leonid Mirny , Kirill S. Korolev

The transport of ligands, such as NO or O$_2$, through internal cavities is essential for the function of globular proteins, including hemoglobin, myoglobin (Mb), neuroglobin, truncated hemoglobins, or cytoglobin. For Mb, several internal…

Chemical Physics · Physics 2023-04-12 Haydar Taylan Turan , Eric Boittier , Markus Meuwly

Breast cancer is a significant health concern affecting millions of women worldwide. Accurate survival risk stratification plays a crucial role in guiding personalised treatment decisions and improving patient outcomes. Here we present…

Computer Vision and Pattern Recognition · Computer Science 2024-07-02 Raktim Kumar Mondol , Ewan K. A. Millar , Arcot Sowmya , Erik Meijering

Heterogeneity is ubiquitous in stem cells (SC), cancer cells (CS), and cancer stem cells (CSC). SC and CSC heterogeneity is manifested as diverse sub-populations with self-renewing and unique regeneration capacity. Moreover, the CSC progeny…

Molecular Networks · Quantitative Biology 2024-06-19 Chong Yu , Qiong Liu , Cong Chen , Jin Wang

Resistance to chemotherapies, particularly to anticancer treatments, is an increasing medical concern. Among the many mechanisms at work in cancers, one of the most important is the selection of tumor cells expressing resistance genes or…

Analysis of PDEs · Mathematics 2012-07-05 Alexander Lorz , Tommaso Lorenzi , Michael E. Hochberg , Jean Clairambault , Benoit Perthame

Background: Bladder cancer is the 10th most common cancer worldwide, and its prevalence is increasing, especially in developing countries. Objective: In the present study, we employed gene expression profiles from the GSE163209 data set in…

Genomics · Quantitative Biology 2021-12-28 S. Sajedeh Mousavi , Mohammad Jalil Zorriehzahra

Apoptosis is an important area of research because of its role in keeping a mature multicellular organism's number of cells constant hence, ensuring that the organism does not have cell accumulation that may transform into cancer with…

Molecular Networks · Quantitative Biology 2010-10-01 Elife Zerrin Bagci , Sercan Murat Sen , Mehmet Cihan Camurdan

Chemotherapy is one of the most important therapeutic options used to treat human cancers, either alone or in combination with radiation therapy and surgery. Recent studies have indicated that intra-tumoural heterogeneity has a significant…

Tissues and Organs · Quantitative Biology 2014-07-04 Gibin G Powathil , Mark AJ Chaplain , Maciej Swat