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Motivated by the problem of effectively executing clustering algorithms on very large data sets, we address a model for large scale distributed clustering methods. To this end, we briefly recall some standards on the quantization problem…

Statistics Theory · Mathematics 2011-11-30 Benoît Patra

We present a new adaptive parallel algorithm for the challenging problem of multi-dimensional numerical integration on massively parallel architectures. Adaptive algorithms have demonstrated the best performance, but efficient many-core…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-24 Ioannis Sakiotis , Kamesh Arumugam , Marc Paterno , Desh Ranjan , Balša Terzić , Mohammad Zubair

A distributed algorithm performs local computations on pieces of input and communicates the results through given communication links. When processing a massive graph in a distributed algorithm, local outputs must be configured as a…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-12-06 Fan Chung , Olivia Simpson

Recent studies revealed an important interplay between the detailed structure of fibration symmetric circuits and the functionality of biological and non-biological networks within which they have be identified. The presence of these…

Molecular Networks · Quantitative Biology 2022-04-06 Higor S. Monteiro , Ian Leifer , Saulo D. S. Reis , José S. Andrade, , Hernan A. Makse

This paper presents the design and analysis of parallel approximation algorithms for facility-location problems, including $\NC$ and $\RNC$ algorithms for (metric) facility location, $k$-center, $k$-median, and $k$-means. These problems…

Data Structures and Algorithms · Computer Science 2010-06-11 Guy E. Blelloch , Kanat Tangwongsan

By a high-order numerical homogenization method, a heterogeneous multiscale scheme was developed in Jin & Li (2022) for evolving differential equations containing two time scales. In this paper, we further explore the technique to propose…

Numerical Analysis · Mathematics 2025-09-25 Bojin Chen , Zeyu Jin , Ruo Li

Large-scale parallel numerical simulations are essential for a wide range of engineering problems that involve complex, coupled physical processes interacting across a broad range of spatial and temporal scales. The data structures involved…

Mathematical Software · Computer Science 2018-10-11 Fande Kong , Roy H. Stogner , Derek R. Gaston , John W. Peterson , Cody J. Permann , Andrew E. Slaughter , Richard C. Martineau

We present a new algorithm for solving linear-quadratic regulator (LQR) problems with linear equality constraints, also known as constrained LQR (CLQR) problems. Our method's sequential runtime is linear in the number of stages and…

Optimization and Control · Mathematics 2024-08-06 João Sousa-Pinto , Dominique Orban

Among the novel metrics used to study the relative importance of nodes in complex networks, k-core decomposition has found a number of applications in areas as diverse as sociology, proteinomics, graph visualization, and distributed system…

Other Computer Science · Computer Science 2011-03-30 Alberto Montresor , Francesco De Pellegrini , Daniele Miorandi

Processing large complex networks like social networks or web graphs has recently attracted considerable interest. In order to do this in parallel, we need to partition them into pieces of about equal size. Unfortunately, previous parallel…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-01-27 Henning Meyerhenke , Peter Sanders , Christian Schulz

In a technological landscape that is quickly moving toward dense multi-CPU and multi-core computer systems, where using multithreading is an increasingly popular application design decision, it is important to choose a proper model for…

Networking and Internet Architecture · Computer Science 2009-09-29 Ivan Voras , Mario Zagar

This manuscript describes a technique for computing partial rank-revealing factorizations, such as, e.g, a partial QR factorization or a partial singular value decomposition. The method takes as input a tolerance $\varepsilon$ and an…

Numerical Analysis · Mathematics 2015-06-19 Per-Gunnar Martinsson , Sergey Voronin

Coupled cluster theory is a vital cornerstone of electronic structure theory and is being applied to ever-larger systems. Stochastic approaches to quantum chemistry have grown in importance and offer compelling advantages over traditional…

Modern algorithms for de novo prediction of protein structures typically output multiple full-length models (decoys) rather than a single solution. Subsequent clustering of such decoys is used both to gauge the success of the modelling and…

Biomolecules · Quantitative Biology 2017-12-12 Dmytro Guzenko , Sergei V. Strelkov

Noisy intermediate-scale quantum processors have produced a quantum computation revolution in recent times. However, to make further advances new strategies to overcome the error rate growth are needed. One possible way out is dividing…

Quantum Physics · Physics 2025-01-20 J. Montes , F. Borondo , Gabriel G. Carlo

Nowadays, with the widespread of smartphones and other portable gadgets equipped with a variety of sensors, data is ubiquitous available and the focus of machine learning has shifted from being able to infer from small training samples to…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-07-07 Radu Cristian Ionescu

We present a parallel hierarchical solver for general sparse linear systems on distributed-memory machines. For large-scale problems, this fully algebraic algorithm is faster and more memory-efficient than sparse direct solvers because it…

Numerical Analysis · Mathematics 2017-12-21 Chao Chen , Hadi Pouransari , Sivasankaran Rajamanickam , Erik G. Boman , Eric Darve

We study general techniques for implementing distributed data structures on top of future many-core architectures with non cache-coherent or partially cache-coherent memory. With the goal of contributing towards what might become, in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-09 Panagiota Fatourou , Nikolaos D. Kallimanis , Eleni Kanellou , Odysseas Makridakis , Christi Symeonidou

Recommendation systems, social network analysis, medical imaging, and data mining often involve processing sparse high-dimensional data. Such high-dimensional data are naturally represented as tensors, and they cannot be efficiently…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-22 Weiyun Jiang , Kaiqi Zhang , Colin Yu Lin , Feng Xing , Zheng Zhang

In this work, a new parallel dual-grid multiscale approach for CFD-DEM couplings is investigated. Dual- grid multiscale CFD-DEM couplings have been recently developed and successfully adopted in different applications still, an efficient…

Computational Engineering, Finance, and Science · Computer Science 2018-12-26 Gabriele Pozzetti , Hrvoje Jasak , Xavier Besseron , Alban Rousset , Bernhard Peters