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Stochastic, spatial reaction-diffusion simulations have been widely used in systems biology and computational neuroscience. However, the increasing scale and complexity of simulated models and morphologies have exceeded the capacity of any…

Quantitative Methods · Quantitative Biology 2016-10-10 Weiliang Chen , Erik De Schutter

Parameter-efficient fine-tuning (PEFT) has become increasingly important as foundation models continue to grow in both popularity and size. Adapter has been particularly well-received due to their potential for parameter reduction and…

Computer Vision and Pattern Recognition · Computer Science 2024-06-07 Minglei Li , Peng Ye , Yongqi Huang , Lin Zhang , Tao Chen , Tong He , Jiayuan Fan , Wanli Ouyang

The prospect of nonparametric reconstructions of cosmological parameters from observational data sets has been a popular topic in the literature for a number of years. This has mainly taken the form of a technique based on Gaussian…

Cosmology and Nongalactic Astrophysics · Physics 2022-02-24 Konstantinos Dialektopoulos , Jackson Levi Said , Jurgen Mifsud , Joseph Sultana , Kristian Zarb Adami

Adaptive mesh refinement is a key component of efficient unstructured space-time finite element methods. Underlying any adaptive mesh refinement scheme is, of course, a method for local refinement of simplices. However, simplex bisection…

Numerical Analysis · Mathematics 2021-08-16 David Lenz

The main drawback for the application of the conforming Argyris FEM is the labourious implementation on the one hand and the low convergence rates on the other. If no appropriate adaptive meshes are utilised, only the convergence rate…

Numerical Analysis · Mathematics 2022-07-21 Benedikt Gräßle

Adaptive optics systems are essential on all large telescopes where image quality is important. These are complex systems with many design parameters requiring optimisation before good performance can be achieved. The simulation of adaptive…

Astrophysics · Physics 2007-05-23 Alastair Basden , Timothy Butterley , Richard Myers , Richard Wilson

We propose a novel multimesh rational approximation scheme for the numerical solution of the (homogeneous) Dirichlet problem for the spectral fractional Laplacian. The scheme combines a rational approximation of the function $\lambda…

Numerical Analysis · Mathematics 2026-02-03 Alex Bespalov , Raphaël Bulle

Simulation and modeling are essential in product development, integrated into the design and manufacturing process to enhance efficiency and quality. They are typically represented as complex nonlinear differential algebraic equations. The…

Machine Learning · Computer Science 2026-03-25 Wenqiang Yang , Wenyuan Wu , Yong Feng , Changbo Chen

The computational modeling of high-speed flows (e.g. hypersonic) and space plasmas is characterized by a plethora of complex physical phenomena, in particular involving strong oblique shocks, bow shocks and/or shock waves boundary layer…

Computational Physics · Physics 2025-11-19 Firas Ben Ameur , Andrea Lani

Deep surrogate models for parametric partial differential equations (PDEs) can deliver high-fidelity approximations but remain prohibitively data-hungry: training often requires thousands of fine-grid simulations, each incurring substantial…

Machine Learning · Computer Science 2026-03-03 Yang Meng , Ruoxi Jiang , Zhuokai Zhao , Chong Liu , Rebecca Willett , Yuxin Chen

This work presents a new adaptive approach for the numerical simulation of a phase-field model for fractures in nearly incompressible solids. In order to cope with locking effects, we use a recently proposed mixed form where we have a…

Numerical Analysis · Mathematics 2021-06-18 Katrin Mang , Mirjam Walloth , Thomas Wick , Winnifried Wollner

Adaptive Finite Element Method (adaptivity) is known to be an effective numerical tool for some ill-posed problems. The key advantage of the adaptivity is the image improvement with local mesh refinements. A rigorous proof of this property…

Mathematical Physics · Physics 2012-10-30 Larisa Beilina , Michael V. Klibanov

Unstructured meshes are characterized by data points irregularly distributed in the Euclidian space. Due to the irregular nature of these data, computing connectivity information between the mesh elements requires much more time and memory…

Data Structures and Algorithms · Computer Science 2025-04-03 Guoxi Liu , Federico Iuricich

We proposed MATEX, a distributed framework for transient simulation of power distribution networks (PDNs). MATEX utilizes matrix exponential kernel with Krylov subspace approximations to solve differential equations of linear circuit.…

Computational Engineering, Finance, and Science · Computer Science 2016-11-17 Hao Zhuang , Shih-Hung Weng , Jeng-Hau Lin , Chung-Kuan Cheng

Optical metasurfaces are planar arrangements of subwavelength meta-atoms that implement a wide range of transformations on incident light. The design of efficient metasurfaces requires that the responses of and interactions among meta-atoms…

Optics · Physics 2021-01-19 Mahdad Mansouree , Andrew McClung , Sarath Samudrala , Amir Arbabi

Simulating interactions between deformable bodies is vital in fields like material science, mechanical design, and robotics. While learning-based methods with Graph Neural Networks (GNNs) are effective at solving complex physical systems,…

Machine Learning · Computer Science 2025-07-21 Hao Wang , Yu Liu , Daniel Biggs , Haoru Wang , Jiandong Yu , Ping Huang

Over the last decade block-structured adaptive mesh refinement (SAMR) has found increasing use in large, publicly available codes and frameworks. SAMR frameworks have evolved along different paths. Some have stayed focused on specific…

Finding coarse representations of large graphs is an important computational problem in the fields of scientific computing, large scale graph partitioning, and the reduction of geometric meshes. Of particular interest in all of these fields…

Discrete Mathematics · Computer Science 2022-04-26 Christopher Brissette , Andy Huang , George Slota

In this paper we introduce Enzo, a 3D MPI-parallel Eulerian block-structured adaptive mesh refinement cosmology code. Enzo is designed to simulate cosmological structure formation, but can also be used to simulate a wide range of…

This article investigates adaptive mesh refinement procedures for the time-domain wave equation with Neumann boundary conditions, formulated as an equivalent hypersingular boundary integral equation. Space-adaptive and time-adaptive…

Numerical Analysis · Mathematics 2025-08-28 Alessandra Aimi , Giulia Di Credico , Heiko Gimperlein , Chiara Guardasoni
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