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We consider the problem of learning causal directed acyclic graphs from an observational joint distribution. One can use these graphs to predict the outcome of interventional experiments, from which data are often not available. We show…

Machine Learning · Statistics 2016-08-18 Jonas Peters , Joris Mooij , Dominik Janzing , Bernhard Schölkopf

Bayesian networks faithfully represent the symmetric conditional independences existing between the components of a random vector. Staged trees are an extension of Bayesian networks for categorical random vectors whose graph represents…

Machine Learning · Statistics 2022-03-10 Manuele Leonelli , Gherardo Varando

We consider graphs that represent pairwise marginal independencies amongst a set of variables (for instance, the zero entries of a covariance matrix for normal data). We characterize the directed acyclic graphs (DAGs) that faithfully…

Artificial Intelligence · Computer Science 2015-08-04 Johannes Textor , Alexander Idelberger , Maciej Liśkiewicz

Learning the structure of causal directed acyclic graphs (DAGs) is useful in many areas of machine learning and artificial intelligence, with wide applications. However, in the high-dimensional setting, it is challenging to obtain good…

Machine Learning · Statistics 2024-05-27 Stephen Smith , Qing Zhou

Recently, techniques for applying convolutional neural networks to graph-structured data have emerged. Graph convolutional neural networks (GCNNs) have been used to address node and graph classification and matrix completion. Although the…

Machine Learning · Statistics 2018-11-28 Yingxue Zhang , Soumyasundar Pal , Mark Coates , Deniz Üstebay

Thermodynamics-informed neural networks employ inductive biases for the enforcement of the first and second principles of thermodynamics. To construct these biases, a metriplectic evolution of the system is assumed. This provides excellent…

Machine Learning · Computer Science 2025-01-22 Alicia Tierz , Iciar Alfaro , David González , Francisco Chinesta , Elías Cueto

We develop the theory linking 'E-separation' in directed mixed graphs (DMGs) with conditional independence relations among coordinate processes in stochastic differential equations (SDEs), where causal relationships are determined by "which…

Machine Learning · Computer Science 2025-03-14 Georg Manten , Cecilia Casolo , Søren Wengel Mogensen , Niki Kilbertus

Markov networks are probabilistic graphical models that employ undirected graphs to depict conditional independence relationships among variables. Our focus lies in constraint-based structure learning, which entails learning the undirected…

Machine Learning · Computer Science 2024-03-14 Tuukka Korhonen , Fedor V. Fomin , Pekka Parviainen

Traditionally, graph neural networks have been trained using a single observed graph. However, the observed graph represents only one possible realization. In many applications, the graph may encounter uncertainties, such as having…

Machine Learning · Computer Science 2024-10-10 See Hian Lee , Feng Ji , Kelin Xia , Wee Peng Tay

Graph clustering is a fundamental technique in data analysis with applications in many different fields. While there is a large body of work on clustering undirected graphs, the problem of clustering directed graphs is much less understood.…

Physics and Society · Physics 2025-01-31 James Martin , Tim Rogers , Luca Zanetti

We present a graphical criterion for reading dependencies from the minimal directed independence map G of a graphoid p when G is a polytree and p satisfies composition and weak transitivity. We prove that the criterion is sound and…

Artificial Intelligence · Computer Science 2012-06-26 Jose M. Pena

Given a Bayesian network structure (directed acyclic graph), the celebrated d-separation algorithm efficiently determines whether the network structure implies a given conditional independence relation. We show that this changes drastically…

Computational Complexity · Computer Science 2024-05-14 Cheuk Ting Li

Given a plane graph $G$ (i.e., a planar graph with a fixed planar embedding) and a simple cycle $C$ in $G$ whose vertices are mapped to a convex polygon, we consider the question whether this drawing can be extended to a planar…

Computational Geometry · Computer Science 2013-08-16 Tamara Mchedlidze , Martin Nöllenburg , Ignaz Rutter

Inferring graph structure from observations on the nodes is an important and popular network science task. Departing from the more common inference of a single graph and motivated by social and biological networks, we study the problem of…

Machine Learning · Statistics 2020-10-19 Madeline Navarro , Yuhao Wang , Antonio G. Marques , Caroline Uhler , Santiago Segarra

Statistical inference for exponential-family models of random graphs with dependent edges is challenging. We stress the importance of additional structure and show that additional structure facilitates statistical inference. A simple…

Statistics Theory · Mathematics 2020-03-13 Michael Schweinberger , Jonathan Stewart

Scott proved in 1997 that for any tree $T$, every graph with bounded clique number which does not contain any subdivision of $T$ as an induced subgraph has bounded chromatic number. Scott also conjectured that the same should hold if $T$ is…

Combinatorics · Mathematics 2022-03-03 Jérémie Chalopin , Louis Esperet , Zhentao Li , Patrice Ossona de Mendez

The Lescure-Meyniel conjecture is the analogue of Hadwiger's conjecture for the immersion order. It states that every graph $G$ contains the complete graph $K_{\chi(G)}$ as an immersion, and like its minor-order counterpart it is open even…

Combinatorics · Mathematics 2023-08-15 Daniel A. Quiroz

Randomising networks using a naive `accept-all' edge-swap algorithm is generally biased. Building on recent results for nondirected graphs, we construct an ergodic detailed balance Markov chain with non-trivial acceptance probabilities for…

Quantitative Methods · Quantitative Biology 2011-12-21 E. S. Roberts , A. C. C. Coolen

The empirical success of deep learning is often attributed to deep networks' ability to exploit hierarchical structure in data, constructing increasingly complex features across layers. Yet despite substantial progress in deep learning…

Machine Learning · Computer Science 2026-01-28 Yunwei Ren , Yatin Dandi , Florent Krzakala , Jason D. Lee

Since their introduction by Kipf and Welling in $2017$, a primary use of graph convolutional networks is transductive node classification, where missing labels are inferred within a single observed graph and its feature matrix. Despite the…

Machine Learning · Statistics 2025-09-09 Nils Detering , Luca Galimberti , Anastasis Kratsios , Giulia Livieri , A. Martina Neuman
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