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Related papers: Toward tunable RNA thermo-switches for temperature…

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Motivation: RNA thermometers (RNATs) are cis-regulatory ele- ments that change secondary structure upon temperature shift. Often involved in the regulation of heat shock, cold shock and virulence genes, RNATs constitute an interesting…

DNA has a well-defined structural transition -- the denaturation of its double-stranded form into two single strands -- that strongly affects its thermal transport properties. We show that, according to a widely implemented model for DNA…

Soft Condensed Matter · Physics 2013-02-12 Chih-Chun Chien , Kirill A. Velizhanin , Yonatan Dubi , Michael Zwolak

Conformational entropy for atomic-level, three dimensional biomolecules is known experimentally to play an important role in protein-ligand discrimination, yet reliable computation of entropy remains a difficult problem. Here we describe…

Biomolecules · Quantitative Biology 2016-02-17 Juan Antonio Garcia-Martin , Peter Clote

Luminescence thermometry has been extensively exploited in the last decades both from the fundamental and applied point of views. The application of photoluminescent nanoparticles on the microscopic level based on rare-earth doped (RED)…

Control over surface temperature is of paramount importance in optoelectronics, photocatalysis and biosensing applications, among others. Thermoplasmonic approaches have demonstrated unrivalled performance for controlling surface…

The development of visual luminescent thermometers capable of exhibiting pronounced color changes in response to temperature variations requires the rational design of phosphors with high spectrally selective thermal sensitivity. In this…

Materials Science · Physics 2026-01-21 L. Marciniak , M. Szymczak

Phase-transition-based luminescent thermometers are characterized by two inherent limitations: a narrow thermal operating range and the presence of a hysteresis loop in the thermometric parameter. In this work, we demonstrate that…

Materials Science · Physics 2025-07-21 M. T. Abbas , M. Szymczak , D. Szymanski , J. Zeler , M. Drozd , L. T. K Giang , L. Marciniak

The temperature dependence of the steady-state fluorescence spectrum of anthracene crystals range from 300K to 500K had been investigated, which was in the temperature range of most tabletop laser-driven shock wave experiments. The…

Applied Physics · Physics 2019-08-06 Cheng Tang , Xiaojun Zhu , Yunfei Song , Weilong Liu , Qingxin Yang , Zhe lv , Yanqiang Yang

Undoubtedly, one of the most significant advantages of luminescence thermometry is its ability to be used not only for spot temperature measurements but also for imaging temperature changes. Among the commonly proposed approaches,…

Applied Physics · Physics 2025-06-04 M. Szymczak , D. Szymanski , M. Piasecki , M. Brik , L. Marciniak

We analyze a microscopic RNA model, which includes two widely used models as limiting cases, namely it contains terms for bond as well as for stacking energies. We numerically investigate possible changes in the qualitative and quantitative…

Quantitative Methods · Quantitative Biology 2009-11-10 Bernd Burghardt , Alexander K. Hartmann

One of the key parameters determining the performance of a luminescent thermometer is its relative sensitivity. In ratiometric luminescence thermometry, high relative sensitivity to temperature variations is typically achieved when the two…

Materials Science · Physics 2025-05-20 M. Tahir Abbas , M. Szymczak , M. Drozd , D. Szymanski , A. Owczarek , A. Musialek , L. Marciniak

The ratiometric approach is the most commonly employed readout technique in luminescence thermometry. To address the trade-off between the risk of measurement disturbance in thermometers with high spectral separation of emission bands (due…

We study the folding of RNA secondary structures with quenched sequence randomness by means of the constrained annealing method. A thermodynamic phase transition is induced by including the conformational weight of loop structures. In…

Biological Physics · Physics 2020-02-05 Flavio Iannelli , Yevgeni Mamasakhlisov , Roland R. Netz

Two-dimensional semiconducting materials have a wide range of applications in various fields due to their excellent properties and rich physics. Here, we report a detailed investigation of the temperature dependent Raman and…

Materials Science · Physics 2025-05-05 Atul G. Chakkar , Deepu Kumar , Ashok Kumar , Mahesh Kumar , Pradeep Kumar

Temperature sensors with micro- and nanoscale spatial resolution have long been explored for their potential to investigate the details of physical systems at an unprecedented scale. In particular, the rapid miniaturization of transistor…

The effects of thermal fluctuations on the morphology of two-dimensional materials are hard to harness. We propose that a geometrically constrained graphene nanoribbon (GNR) can exhibit thermally activated snap-through transitions with a…

Soft Condensed Matter · Physics 2025-11-18 Renjie Zhao , Yiquan Zhang , Chenglin Luo , Yihang Wang

Recently, there has been a growing interest in the usage of mm-scale composites of plasmonic nanoparticles for enhancing the rates of chemical reactions; the effect was shown recently to be predominantly associated with the elevated…

Applied Physics · Physics 2023-03-31 Ieng-Wai Un , Yonatan Sivan

If confocal microscopy is an ubiquitous tool in life science, its applications in chemistry and materials science are still, in comparison, very limited. Of particular interest in these domains is the use of confocal microscopy to…

Soft Condensed Matter · Physics 2017-12-25 Dmytro Dedovets , Cécile Monteux , Sylvain Deville

A thermostat senses the temperature of a physical system and switches heating or cooling devices on or off, regulating the flow of heat to maintain the system's temperature near a desired setpoint. Taking advantage of recent advances in…

A thermocouple of Au-Ni with only 2.5-micrometers-wide electrodes on a 30-nm-thick Si3N4 membrane was fabricated by a simple low-resolution electron beam lithography and lift off procedure. The thermocouple is shown to be sensitive to heat…

Mesoscale and Nanoscale Physics · Physics 2018-04-10 Armandas Balcytis , Meguya Ryu , Saulius Juodkazis , Junko Morikawa
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