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In this talk I discuss the general question of the portability of Molecular Dynamics codes for diffusive systems on parallel computers of the APE family. The intrinsic single precision arithmetics of the today available APE platforms does…

Biological Physics · Physics 2009-10-30 G. La Penna , S. Letardi , V. Minicozzi , S. Morante , G. C. Rossi , G. Salina

Mode-division multiplexing (MDM) is seen as a possible solution to satisfy the rising capacity demands of optical communication networks. To make MDM a success, fibers supporting the propagation of a huge number of modes are of interest.…

Computational Physics · Physics 2020-02-19 Marius Brehler , Malte Schirwon , Peter M. Krummrich , Dominik Göddeke

The parallel simulation of Spiking Neural P systems is mainly based on a matrix representation, where the graph inherent to the neural model is encoded in an adjacency matrix. The simulation algorithm is based on a matrix-vector…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-09 Javier Hernández-Tello , Miguel Ángel Martínez-del-Amor , David Orellana-Martín , Francis George C. Cabarle

The conventional spin dynamics simulations are performed in direct products of state spaces of individual spins. In a general system of n spins, the total number of elements in the state basis is >4^n. A system propagation step requires an…

Computational Physics · Physics 2014-07-16 Ilya Kuprov , Nicola Wagner-Rundell , P. J. Hore

We present an optimized version of a cluster labeling algorithm previously introduced by the authors. This algorithm is well suited for large-scale Monte Carlo simulations of spin models using cluster dynamics on parallel computers with…

High Energy Physics - Lattice · Physics 2015-06-25 M. Flanigan , P. Tamayo

A parallel 2D+1 split-step Fourier method with Crank-Nicholson scheme running on multi-core shared memory architectures is developed to study the propagation of ultra-short high-intensity laser pulses in air. The parallel method achieves a…

Optics · Physics 2015-07-23 Cunliang Ma , Wenbin Lin

The simulation of large ensembles of particles is usually parallelized by partitioning the domain spatially and using message passing to communicate between the processes handling neighboring subdomains. The particles are represented as…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-03 Sebastian Eibl , Ulrich Rüde

Stochastic, spatial reaction-diffusion simulations have been widely used in systems biology and computational neuroscience. However, the increasing scale and complexity of simulated models and morphologies have exceeded the capacity of any…

Quantitative Methods · Quantitative Biology 2016-10-10 Weiliang Chen , Erik De Schutter

In this work, a scalable and modular architecture for massive MIMO base stations with distributed processing is proposed. New antennas can readily be added by adding a new node as each node handles all the additional involved processing.…

Signal Processing · Electrical Eng. & Systems 2018-01-25 Erik Bertilsson , Oscar Gustafsson , Erik G. Larsson

We propose a novel perspective on varied-density clustering for high-dimensional data by framing it as a label propagation process in neighborhood graphs that adapt to local density variations. Our method formally connects density-based…

Machine Learning · Computer Science 2025-08-06 Ninh Pham , Yingtao Zheng , Hugo Phibbs

A distributed-memory parallelization strategy for the density matrix renormalization group is proposed for cases where correlation functions are required. This new strategy has substantial improvements with respect to previous works. A…

Strongly Correlated Electrons · Physics 2010-04-20 Julian Rincon , D. J. Garcia , K. Hallberg

In-memory computing technology is used extensively in artificial intelligence devices due to lower power consumption and fast calculation of matrix-based functions. The development of such a device and its integration in a system takes a…

In this paper I describe some results on the use of virtual processors technology for parallelize some SPMD computational programs in a cluster environment. The tested technology is the INTEL Hyper Threading on real processors, and the…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Gianluca Argentini

In distributed systems, communication is a major concern due to issues such as its vulnerability or efficiency. In this paper, we are interested in estimating sparse inverse covariance matrices when samples are distributed into different…

Methodology · Statistics 2016-10-04 Jesús Arroyo , Elizabeth Hou

The last decades have seen a surge of interests in distributed computing thanks to advances in clustered computing and big data technology. Existing distributed algorithms typically assume {\it all the data are already in one place}, and…

Machine Learning · Computer Science 2019-05-07 Donghui Yan , Yingjie Wang , Jin Wang , Guodong Wu , Honggang Wang

The aim of this paper is to develop an approach to visualizations that benefits from distributed computing. Three schemes of process distribution are considered: parallel, pipeline, and expanding pipeline computations. Expanding pipeline…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Mark Burgin , Walter Karplus , Damon Liu

Numerical solution of reaction-diffusion equations in three dimensions is one of the most challenging applied mathematical problems. Since these simulations are very time consuming, any ideas and strategies aiming at the reduction of CPU…

Computational Physics · Physics 2011-08-17 Ferenc Molnar , Ferenc Izsak , Robert Meszaros , Istvan Lagzi

This paper addresses the problem of parallelizing computations to study non-linear dynamics in large networks of non-locally coupled oscillators using heterogeneous computing resources. The proposed approach can be applied to a variety of…

Chaotic Dynamics · Physics 2025-07-04 Oleksandr Sudakov , Volodymyr Maistrenko

This report discusses the implementation of two parallel algorithms on a distributed memory system for studying vortex dynamics in type-II superconductors. These algorithms are the same as that implemented for classical molecular dynamics…

Superconductivity · Physics 2007-05-23 Mahesh Chandran

We evaluate optimized parallel sparse matrix-vector operations for two representative application areas on widespread multicore-based cluster configurations. First the single-socket baseline performance is analyzed and modeled with respect…

Performance · Computer Science 2012-03-01 Gerald Schubert , Georg Hager , Holger Fehske , Gerhard Wellein