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In \cite{siebert2019linear} the authors present a set of integer programs (IPs) for the Steiner tree problem, which can be used for both, the directed and the undirected setting of the problem. Each IP finds an optimal Steiner tree with a…

Combinatorics · Mathematics 2020-02-11 Matias Siebert , Shabbir Ahmed , George Nemhauser

Tree-based phylogenetic networks, which may be roughly defined as leaf-labeled networks built by adding arcs only between the original tree edges, have elegant properties for modeling evolutionary histories. We answer an open question of…

In phylogenetics, tree-based networks are used to model and visualize the evolutionary history of species where reticulate events such as horizontal gene transfer have occurred. Formally, a tree-based network $N$ consists of a phylogenetic…

Discrete Mathematics · Computer Science 2020-08-21 Jonathan Klawitter , Peter Stumpf

We present an algebraic approach to the watershed adapted to edge or node weighted graphs. Starting with the flooding adjunction, we introduce the flooding graphs, for which node and edge weights may be deduced one from the other. Each node…

Computer Vision and Pattern Recognition · Computer Science 2012-04-16 Fernand Meyer

In this paper, we propose a physically inspired graph-theoretical clustering method, which first makes the data points organized into an attractive graph, called In-Tree, via a physically inspired rule, called Nearest Descent (ND). In…

Machine Learning · Computer Science 2018-01-26 Teng Qiu , Kaifu Yang , Chaoyi Li , Yongjie Li

Motivated by evacuation scenarios arising in extreme events such as flooding or forest fires, we study the problem of smoothly scheduling a set of paths in graphs where connections become impassable at some point in time. A schedule is…

Data Structures and Algorithms · Computer Science 2026-03-26 Till Fluschnik , Amela Pucic , Malte Renken

We introduce a methodology to study the possible matter flows of an ecosystem defined by observational biomass data and realistic biological constraints. The flows belong to a polyhedron in a multi dimensional space making statistical…

Adaptation and Self-Organizing Systems · Physics 2021-02-04 Jean-Guy Caputo , Valerie Girardin , Arnaud Knippel , Hieu Nguyen , Nathalie Niquil , Quentin Nogues

The Angular Constrained Minimum Spanning Tree Problem ($\alpha$-MSTP) is defined in terms of a complete undirected graph $G=(V,E)$ and an angle $\alpha \in (0,2\pi]$. Vertices of $G$ define points in the Euclidean plane while edges, the…

Optimization and Control · Mathematics 2020-05-26 Alexandre Salles da Cunha

We study the problem of finding strain-minimising stream surfaces in a divergence-free vector field. These surfaces are generated by motions of seed curves that propagate through the field in a strain minimising manner, i.e., they move…

Differential Geometry · Mathematics 2016-08-10 Michael Bartoň , Jiří Kosinka , Victor M. Calo

We define a search problem on trees that closely captures the backtracking behavior of all current practical graph isomorphism algorithms. Given two trees with colored leaves, the goal is to find two leaves of matching color, one in each of…

Data Structures and Algorithms · Computer Science 2020-11-04 Markus Anders , Pascal Schweitzer

Given a connected, undirected graph whose edges are labelled (or coloured), the minimum labelling spanning tree (MLST) problem seeks a spanning tree whose edges have the smallest number of distinct labels (or colours). In recent work, the…

Optimization and Control · Mathematics 2014-03-05 Sergio Consoli , Nenad Mladenovic , Jose Andres Moreno-Perez

Network design under uncertainty arises in countless real-world settings and can be captured by the Stochastic Steiner Tree Problem (SSTP). Although there are a few approaches specifically tailored to this stochastic optimization problem,…

Optimization and Control · Mathematics 2026-03-02 Berend Markhorst , Alessandro Zocca , Joost Berkhout , Rob van der Mei

With applications in distribution systems and communication networks, the minimum stretch spanning tree problem is to find a spanning tree T of a graph G such that the maximum distance in T between two adjacent vertices is minimized. The…

Combinatorics · Mathematics 2017-12-12 Lan Lin , Yixun Lin

Transport networks are crucial to the functioning of natural and technological systems. Nature features transport networks that are adaptive over a vast range of parameters, thus providing an impressive level of robustness in supply.…

Adaptation and Self-Organizing Systems · Physics 2017-11-28 Erik Andreas Martens , Konstantin Klemm

Large tree structures are ubiquitous and real-world relational datasets often have information associated with nodes (e.g., labels or other attributes) and edges (e.g., weights or distances) that need to be communicated to the viewers. Yet,…

Computational Geometry · Computer Science 2023-05-18 Kathryn Gray , Mingwei Li , Reyan Ahmed , Md. Khaledur Rahman , Ariful Azad , Stephen Kobourov , Katy Börner

The Steiner $k$-eccentricity of a vertex $v$ of a graph $G$ is the maximum Steiner distance over all $k$-subsets of $V (G)$ which contain $v$. In this note, we design a linear algorithm for computing the Steiner $3$-eccentricities and the…

Data Structures and Algorithms · Computer Science 2021-02-23 Aleksandar Ilic

The expansion of Fiber-To-The-Home (FTTH) networks creates high costs due to expensive excavation procedures. Optimizing the planning process and minimizing the cost of the earth excavation work therefore lead to large savings.…

Artificial Intelligence · Computer Science 2021-11-25 Tobias Müller , Kyrill Schmid , Daniëlle Schuman , Thomas Gabor , Markus Friedrich , Marc Geitz

The phenomenon of self-organization has been of special interest to the neural network community for decades. In this paper, we study a variant of the Self-Organizing Map (SOM) that models the phenomenon of self-organization of the…

Artificial Intelligence · Computer Science 2021-02-17 Bonny Banerjee

Trees with many leaves have applications on broadcasting, which is a method in networks for transferring a message to all recipients simultaneously. Internal nodes of a broadcasting tree require more expensive technology, because they have…

Data Structures and Algorithms · Computer Science 2021-11-29 Cristina G. Fernandes , Carla N. Lintzmayer

Rapidly-exploring Random Tree star (RRT*) has recently gained immense popularity in the motion planning community as it provides a probabilistically complete and asymptotically optimal solution without requiring the complete information of…

Robotics · Computer Science 2018-07-24 Zaid Tahir , Ahmed H. Qureshi , Yasar Ayaz , Raheel Nawaz
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