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We explore how physical scale and population size shape the emergence of complex behaviors in open-ended ecological environments. In our setting, agents are unsupervised and have no explicit rewards or learning objectives but instead evolve…

We study the competition between several advantageous mutants in an asexual population (clonal interference) as a function of the time between the appearance of the mutants, their selective advantages, and the rate of deleterious mutations.…

Biological Physics · Physics 2007-05-23 Paulo R. A. Campos , Christoph Adami , Claus O. Wilke

The adaptation process of a species to a new environment is a significant area of study in biology. As part of natural selection, adaptation is a mutation process which improves survival skills and reproductive functions of species. Here,…

Populations and Evolution · Quantitative Biology 2017-10-27 Maria Kleshnina , Jerzy A. Filar , Vladimir Ejov , Jody C. McKerral

A deterministic population dynamics model involving birth and death for a two-species system, comprising a wild-type and more resistant species competing via logistic growth, is subjected to two distinct stress environments designed to…

Biological Physics · Physics 2018-02-08 Marianne Bauer , Isabella R. Graf , Vudtiwat Ngampruetikorn , Greg J. Stephens , Erwin Frey

Biological and social scientists have long been interested in understanding how to reconcile individual and collective interests in iterated Prisoner's Dilemma. Many effective strategies have been proposed, and they are often categorized…

Physics and Society · Physics 2023-08-30 Yohsuke Murase , Seung Ki Baek

This paper studies a variant of the multi-type contact process as a model for the competition between cooperators and defectors on integer lattices. Regardless of their type, individuals die at rate one. Defectors give birth at a fixed rate…

Probability · Mathematics 2018-05-17 Nicolas Lanchier

In ecological systems heterogeneous interactions between pathogens take place simultaneously. This occurs, for instance, when two pathogens cooperate, while at the same time multiple strains of these pathogens co-circulate and compete.…

Populations and Evolution · Quantitative Biology 2025-05-05 Francesco Pinotti , Fakhteh Ghanbarnejad , Philipp Hövel , Chiara Poletto

In this study, we investigate the dynamics of a spatial and non spatial prey-predator interaction model that includes the following: (i) fear effect incorporated in prey birth rate; (ii) group defence of prey against predators; and (iii)…

Populations and Evolution · Quantitative Biology 2023-11-07 Shivam Yadav , Jai Prakash Tripathi , Shrichand Bhuria , Satish Kumar Tiwari , Deepak Tripathi , Vandana Tiwari , Ranjit Kumar Upadhyay , Yun Kang

The design of mechanisms that encourage pro-social behaviours in populations of self-regarding agents is recognised as a major theoretical challenge within several areas of social, life and engineering sciences. When interference from…

Computer Science and Game Theory · Computer Science 2020-01-27 Theodor Cimpeanu , The Anh Han , Francisco C. Santos

The complexity of an ecological community can be distilled into a network, where diverse interactions connect species in a web of dependencies. Species interact not only with each other but indirectly through environmental effects, however…

Populations and Evolution · Quantitative Biology 2020-09-09 Justin D. Yeakel , Mathias M. Pires , Marcus A. M. de Aguiar , James L. O'Donnell , Paulo R. Guimarães , Dominique Gravel , Thilo Gross

Quantifying interaction strength between species is of interest in food web studies for understanding population dynamics. Theory has run ahead of experiment in solving equations describing ecological systems (the Lotka-Volterra equations,…

Populations and Evolution · Quantitative Biology 2013-05-07 Joshua M. Courtney , Amy C. Courtney , Michael W. Courtney

Pathogen transmission and virulence are main evolutionary variables broadly assumed to be linked through trade-offs. In well-mixed populations, these trade-offs are often ascribed to physiological restrictions, while populations with…

Populations and Evolution · Quantitative Biology 2018-09-10 Victor Buendía , Miguel A. Muñoz , Susanna Manrubia

Genetic information and environmental factors determine the path of an individuals life and therefore, the evolution of its entire species. We have succeeded in proposing and studying a model that captures this idea. In our model, a…

Populations and Evolution · Quantitative Biology 2021-07-28 N. Abadi , G. Abramson

Evolutionary game theory assumes that individuals maximize their benefits when choosing strategies. However, an alternative perspective proposes that individuals seek to maximize the benefits of others. To explore the relationship between…

Physics and Society · Physics 2024-05-16 Chaoqian Wang , Attila Szolnoki

We study the emergence of cell differentiation under the assumption of the existence of a given number of tradeoffs between genes encoding different functions. In the model the viability of colonies is determined by the capability of their…

Populations and Evolution · Quantitative Biology 2017-06-06 André Amado , Paulo R. A. Campos

Cooperation in evolutionary biology means paying a cost, c, to enjoy benefits, b. A defector is one who does not pay any cost but enjoys the benefits of cooperators. Human societies, especially, have evolved a strategy to discourage…

Populations and Evolution · Quantitative Biology 2020-09-02 Ivan Ezeigbo

Competition between species and genotypes is a dominant factor in a variety of ecological and evolutionary processes. Biological dynamics are typically highly stochastic, and therefore, analyzing a competitive system requires accounting for…

Populations and Evolution · Quantitative Biology 2025-01-09 Ori Turkia , Nadav M. Shnerb

The biological requirements for an ecosystem to develop and maintain species diversity are in general unknown. Here we consider a model ecosystem of sessile and mutually excluding organisms competing for space [Mathiesen et al. Phys. Rev.…

Populations and Evolution · Quantitative Biology 2012-09-10 Namiko Mitarai , Joachim Mathiesen , Kim Sneppen

The double slit experiment provides a clear demarcation between classical and quantum theory, while multi-slit experiments demarcate quantum and higher-order interference theories. In this work we show that these experiments pertain to a…

Quantum Physics · Physics 2021-03-11 Sebastian Horvat , Borivoje Dakić

A fundamental problem in evolutionary ecology research is to explain how different species coexist in natural ecosystems. This question is directly related with species trophic competition. However, competition theory, based on the…

Populations and Evolution · Quantitative Biology 2007-05-23 D. Balciunas
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